Gene Information

Name : Sama_1960 (Sama_1960)
Accession : YP_927835.1
Strain : Shewanella amazonensis SB2B
Genome accession: NC_008700
Putative virulence/resistance : Unknown
Product : cold-shock DNA-binding domain-containing protein
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 2389189 - 2389401 bp
Length : 213 bp
Strand : +
Note : KEGG: plt:Plut_0244 putative cold-shock DNA-binding domain protein

DNA sequence :
ATGTCGGCCCCACAGCACACTGGTACAGTAAAATGGTTTAACGACGAGAAAGGTTTTGGCTTCCTGAGTCGCGATAATGA
TTCAGATGTATTTGTTCACTACCGCGCTATCAATACTCAGGGAAGACGCACTTTAAAAGAAGGTCAAAAAGTCAGCTTCA
GCCTGGTTGAAGGCCAAAAGGGCCTCCTGGCAGCAAACGTCACGCCACTGTGA

Protein sequence :
MSAPQHTGTVKWFNDEKGFGFLSRDNDSDVFVHYRAINTQGRRTLKEGQKVSFSLVEGQKGLLAANVTPL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 5e-13 59