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Name : Sama_0248 (Sama_0248) Accession : YP_926129.1 Strain : Shewanella amazonensis SB2B Genome accession: NC_008700 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 271790 - 273766 bp Length : 1977 bp Strand : + Note : KEGG: son:SO0266 cytochrome c-type biogenesis protein CcmF DNA sequence : ATGATCCCGGAACTTGGACACTTTGCGCTGATAACAGGACTGGCATTTGCCTTACTGCTCAGCTGCGTGCCGCTCATTGG GGTAGCGCGCAAAGATCAGTATCTGGTGCGTTACGCCTGGCCATTGGCTTACGGTATGTTTCTGTTCATTGCACTGTCTG TTGTGACTCTGGCGTACAGCTTCGCGGTCGATGATTTTTCTGTTGCTTACGTGGCACACCATTCCAATTCTCAGCTTCCG AGCTTCTTCAAGATAGCGGCCGTTTGGGGTGGTCACGAAGGCTCTCTGCTGTTTTGGGTATTCTCCTTGTCTGTATGGGC TGCAGCCGTAGCCAAGTTCAGCAAAGGACTGGAAGAAGTCTTTACCGCCCGGGTACTGGCGGTGCTCGGTATGATTACTG TGGGCTTCACCCTGTTTATGCTGCTGACCTCCAGCCCGTTCGAGCGCCTATTCCCTGCGCCGATGGAAGGTCGAGACCTA AACCCCATGCTGCAGGACGTAGGCCTTATCTTCCACCCACCCATGCTGTATCTGGGATATGTGGGCTTCTCTGTCAGCTT TGCCTTTGCGATTGCCGCACTGCTCAGTGGTCGTCTCGATTCTGCCTGGGCACGCTGGAGCCGTCCCTGGACACTGGCCG CCTGGATTTTCCTGACCGGTGGTATTGCGCTGGGTTCCTGGTGGGCTTACTACGAGCTCGGCTGGGGTGGCTGGTGGTTC TGGGATCCGGTCGAAAACGCGTCCTTTATGCCATGGCTGATTGGTACCGCACTGGTGCACTCACTGATTGTGACCGAAAA GCGCGGTACCTTCCGTAACTGGACGGTACTGCTGTCTATCTTTGCCTTCTCTTTGAGTTTGCTCGGTACCTTTATTGTGC GTTCCGGCGTGCTGACATCGGTGCACTCATTCGCTGCCGATCCAAGCCGCGGTATGTTTATTCTCTTACTGCTTGGTCTT GCTATTGGTGGCTCACTCACACTGTTTGCGTTCCGTGCCAGTGAAATGAGCAGTCCAGCGAAGTTTGAACTCTGGTCAAA AGAAACCATGCTGCTGGTATGTAACCTGCTGCTGACCGTTGCCTGTGGCACAGTGCTGCTGGGTACTCTTTACCCACTGC TGATTGATGCGCTGGGCATGGGTAAGATTTCTGTAGGCCCACCATACTTCAATGCCGTATTTGTGCCCATCATCCTGGTG ATGTTTGTGTTCATGGGTATCGGTCCTATTATCCGCTGGAAGAAAGCGAAAGAAGGTGAAGTGAAGCGTCAGCTGTTGAT CCCGGCTATCGTCTCTGCGGTCGTAGGTATTGCAGTGCCTTTCATCGCTGGTGGCGCATTCAACGCCTGGGTTGCTTTGG GTATCGGCGCTGCCGTGTGGATCACCCTGGCCACACTTCGTGCAGGCTATAACATCGTCAAGACCAACGAAGGCCTGAGT CTTGCGCGCATGGGTCGCAGTCAGTTGGGCATGATCATCGCTCACCTGGGGATTGCGGTCTCGGTCGTGGGTGGCACCAT GGTGTCCAACTACTCAATCGAGAAGAGTGTGCGTATGGGTCCGGGTATCAGCCATGAGCTGGCCGGTTATACCTTCAAGT TTACTGAGACCAAAAACGTGGTAGGTCCGAACTACACCGCACAACAAGGTCAGATAGAGGTGTATAAGGGAGACAAGTTC CTGACGCTCCTCAAGCCCGATCGTCGTCAGTACAACGTGCGCACCATGGACATGACCGAAGCCGGGATCGACTGGGGTCT GTTCCGAGATCTGTATGTCACCATGGGTGACCCTATCAGTGCCACCGAGTACGCGGTGCGTTTGAACTACAAGCCATTCG TTCGTTGGTTATGGTTCGGCGGTATCTTTATGATGGTGGGTGGTTTCTTTGCGGCCTCGGATAAACGTTACCGCGTAAAG GCAGCGGCTTCCGACAAAGCTAAAGAAGCGACTAAAGGTAACCTGGCTACAGCCTGA Protein sequence : MIPELGHFALITGLAFALLLSCVPLIGVARKDQYLVRYAWPLAYGMFLFIALSVVTLAYSFAVDDFSVAYVAHHSNSQLP SFFKIAAVWGGHEGSLLFWVFSLSVWAAAVAKFSKGLEEVFTARVLAVLGMITVGFTLFMLLTSSPFERLFPAPMEGRDL NPMLQDVGLIFHPPMLYLGYVGFSVSFAFAIAALLSGRLDSAWARWSRPWTLAAWIFLTGGIALGSWWAYYELGWGGWWF WDPVENASFMPWLIGTALVHSLIVTEKRGTFRNWTVLLSIFAFSLSLLGTFIVRSGVLTSVHSFAADPSRGMFILLLLGL AIGGSLTLFAFRASEMSSPAKFELWSKETMLLVCNLLLTVACGTVLLGTLYPLLIDALGMGKISVGPPYFNAVFVPIILV MFVFMGIGPIIRWKKAKEGEVKRQLLIPAIVSAVVGIAVPFIAGGAFNAWVALGIGAAVWITLATLRAGYNIVKTNEGLS LARMGRSQLGMIIAHLGIAVSVVGGTMVSNYSIEKSVRMGPGISHELAGYTFKFTETKNVVGPNYTAQQGQIEVYKGDKF LTLLKPDRRQYNVRTMDMTEAGIDWGLFRDLYVTMGDPISATEYAVRLNYKPFVRWLWFGGIFMMVGGFFAASDKRYRVK AAASDKAKEATKGNLATA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 3e-148 | 56 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 7e-129 | 51 |
