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Name : glcD1 (azo0998) Accession : YP_932502.1 Strain : Azoarcus sp. BH72 Genome accession: NC_008702 Putative virulence/resistance : Unknown Product : glycolate oxidase subunit GlcD Function : - COG functional category : C : Energy production and conversion COG ID : COG0277 EC number : - Position : 1072863 - 1074362 bp Length : 1500 bp Strand : + Note : Probable glycolate oxidase subunit glcD. Homology to glcD of E. coli of 64% (sprot|GLCD_ECOLI) InterPro: FAD linked oxidase C-terminal (IPR004113); FAD linked oxidase N-terminal (IPR006093) Pfam: FAD binding domain; FAD linked oxidase, C-terminal domain T DNA sequence : GTGGCGCCGGAGGAGGCGGGGATCGCGGAGCGCGACTTTTCCGCGCTCGACAAGGCGCGCGTGGTCGAGGCCCTGGCGCG GGTGTTGCCGGCAGGCGCCTTGATGTTTGAAGCCGAGGATTTGCGGCCTTACGAGTGCGACGGCTTGTCGGCCTACCGCG CGCTGCCGCTGGCGGTGGTGCTGCCGGCCACGGAGGACGAAGTGGTGGCGGTGCTGACGGTGTGCGCCGAACTCGGCGTG CCGGTGGTCGCGCGCGGCGCCGGCACCGGCTTGTCCGGCGGCGCGCTGCCGCATCGCCACGGCGTGCTGCTGTCGCTCGC GCGATTCACCCGCATCCTGCATCTCGATCCGCATGCCCGTACCGCGGTGGTGCAGCCGGGTGTGCGCAACCTCGCGATCT CGGAGGCGGCGGCGCCTTACGGGCTGTACTACGCGCCCGATCCGTCGTCGCAGATCGCCTGCACCATCGGCGGCAACGTG GCGGAAAACTCCGGCGGCGTGCATTGCCTGAAGTACGGCCTGACCGTGCATAACCTGCTGCGGGTGCGAGGGGTGACGAT CGAGGGGGAGGTGGTGGAGTTCGGCAGCCATGCGCTCGATACGCCGGGCTACGACCTGCTGGCCCTGGTCACCGGCTCGG AGGGCATGCTCGCGGTCGTCACCGAGGTGACGGTGCGGCTGACGCCCAAGCCGCAGCTGGCGCAGTGCGTGCTGGCGGCG TTCGACGACGTGGTCAAGGCGGGGGAGGCGGTGGCGGCCATCATCGCTGCGGGCATTATCCCTGCCGGGCTGGAAATGAT GGACCAGCCGGCGACCGCCGCGGTGGAGCAGTTCGTCCATGCCGGTTATCCGCTCGATGCACGCGCCATCCTGCTGTGCG AATCCGACGGCACGCCCGAAGAGGTGGCGGAGGAAATCGTCGCCGTGCGCGCGGTGCTCGAGGCCAGCGGCGCGACGGAG ATCCGCGTCTCGCAGGATGAGGCCGAGCGCCTGCGTTTCTGGGCCGGACGCAAGGCCGCCTTTCCTGCCGCGGGGCGGCT CTCGCCCGACTACTACTGCATGGACGGCACCATCCCGCGCAAGCGCCTGGGCGAAATGCTGGAGGCGATCCAGGGCATGG AGCAGAAGTACGGTCTTGCCTGCATCAACGTCTTCCACGCCGGGGACGGTAACCTGCATCCGTTGATCCTGTTCGACGCC AACCAGCCGGGCGAACTCGAGCGCGCGGAGGCCTTCGGCACCGACATCCTCGAGTTGTCGGTGGCCCTGGGCGGCACGGT GACCGGCGAGCACGGCGTGGGCGTCGAGAAGATCAACCAGATGTGCAGCCAGTTCGGTGAAGGCGAGCGGCTGCAGTTCT TCCGCGTCAAGGCCGCGTTCGATCCGCTCGGCCTGCTCAACCCGGGCAAGGCGATTCCCACCCTGCACCGCTGCGCGGAA TACGGCCGCATGCGCGTCAGCGGGGGCGCCCTGCCGCATCCCGAACTGCCGCGGTTCTGA Protein sequence : MAPEEAGIAERDFSALDKARVVEALARVLPAGALMFEAEDLRPYECDGLSAYRALPLAVVLPATEDEVVAVLTVCAELGV PVVARGAGTGLSGGALPHRHGVLLSLARFTRILHLDPHARTAVVQPGVRNLAISEAAAPYGLYYAPDPSSQIACTIGGNV AENSGGVHCLKYGLTVHNLLRVRGVTIEGEVVEFGSHALDTPGYDLLALVTGSEGMLAVVTEVTVRLTPKPQLAQCVLAA FDDVVKAGEAVAAIIAAGIIPAGLEMMDQPATAAVEQFVHAGYPLDARAILLCESDGTPEEVAEEIVAVRAVLEASGATE IRVSQDEAERLRFWAGRKAAFPAAGRLSPDYYCMDGTIPRKRLGEMLEAIQGMEQKYGLACINVFHAGDGNLHPLILFDA NQPGELERAEAFGTDILELSVALGGTVTGEHGVGVEKINQMCSQFGEGERLQFFRVKAAFDPLGLLNPGKAIPTLHRCAE YGRMRVSGGALPHPELPRF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 9e-134 | 64 |
