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Name : glcF (azo1001) Accession : YP_932505.1 Strain : Azoarcus sp. BH72 Genome accession: NC_008702 Putative virulence/resistance : Unknown Product : glycolate oxidase iron-sulfur subunit Function : - COG functional category : C : Energy production and conversion COG ID : COG0247 EC number : - Position : 1075575 - 1076819 bp Length : 1245 bp Strand : + Note : Probable glycolate oxidase iron-sulfur subunit. Homology to glcF of E. coli of 56% (sprot|GLCF_ECOLI) Pfam: Domain of unknown function (DUF224) (192-256 aa; 329-391 aa) no signal peptide no TMHs; High confidence in function and specificity DNA sequence : ATGCAGACCCAGCTTGCCGATTTCATCCGCGATACGCCTGAAGGCCGCGAGGCTGACGAGATCCTGCGCAAATGCGTGCA TTGCGGCTTCTGCACCGCCACCTGTCCGACCTACCAGTTGCTCGGCGACGAACTGGATGGTCCGCGCGGGCGGATCTACC TGATCAAGCAGTTGCTCGAAGGCCAGCCGGTGACCGAGAAGACCCGCCTGCACCTCGATCGCTGCCTCACCTGCCGGGCC TGTGAAACCACCTGTCCGTCCGGGGTGCACTACAGCCGGCTGGCGGACATCGGCCGTCATCTGGTCGAGCAGCGGGTCCC GCGCCGCGGGGCGGATCGCGCCGCGCGCTGGGTGCTGCGCGAACTGGTGCCGCGTGCGGCCGTCTTCGGCGCCGCGCTGA AGGCGGGCCGCAGCGTGCGTGGGATGCTGCCGGCGACGCTGCGCGACAAGGTGCCCATGGTGCGTGCGCCGGGGCCGTGG CCGCGGCCGCGTCATGCGCGCCGCATGTACGCGCTGGCAGGGTGCGCGCAACCCGCAATGGCGCCGTCGATCAACGCCGC GACCGCACGGGTGCTGGACAGCCTCGGCATCTCGCTGCTGGAGGCGCCCTCCGCCGGCTGCTGTGGCGCGGTCCGTTTCC ATCTCCACGATCACGATGGCGCGCGCGCCGAAGCCCGGCGCAATATCGACGCCTGGTGGCCGGCGATCGAGGGCGGCGAG GTGGAAGGCCTGGTGATGACCGCATCGGGCTGCGGTGTGCAGGTGAAAGACTACGGGCACCTGCTGCAGCACGACCCCGC CTATTCCGCCAAAGCCGCGCGCATCGCCGCGCTGACGCGCGACGTCGCCGAGGTGGTAAGCGCCCAGGAGGCGTCGCTGA AGGCGCTGCTGCGCAGCAAGACGGGCGGGGAAACGGCGGTTGCCTGGCACGCCCCATGCACGCTGCAGCACGGCCTGAAG ATCCGCGGTGCGGTGGAGCAATTGCTGGGTGCTGCCGGCTTTCGCCTGACCCCGGTGCGCGACGCCCACCTGTGTTGCGG TTCCGCGGGAACGTACTCGCTGCTGCAGCCCGAAATCGCCCAGCAACTGCGGGAAAACAAGCTCGCGGCGCTCGGCGAAG GCGGTGCGCCACTCATACTTTCGGCCAATATCGGCTGCATTACCCACTTGCAGGCGGGCACGGCGACCCCCGTCCGGCAC TGGATCGAGGCGATAGACGCGCGGCTCAACGGCTTCCCAATTTGA Protein sequence : MQTQLADFIRDTPEGREADEILRKCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQLLEGQPVTEKTRLHLDRCLTCRA CETTCPSGVHYSRLADIGRHLVEQRVPRRGADRAARWVLRELVPRAAVFGAALKAGRSVRGMLPATLRDKVPMVRAPGPW PRPRHARRMYALAGCAQPAMAPSINAATARVLDSLGISLLEAPSAGCCGAVRFHLHDHDGARAEARRNIDAWWPAIEGGE VEGLVMTASGCGVQVKDYGHLLQHDPAYSAKAARIAALTRDVAEVVSAQEASLKALLRSKTGGETAVAWHAPCTLQHGLK IRGAVEQLLGAAGFRLTPVRDAHLCCGSAGTYSLLQPEIAQQLRENKLAALGEGGAPLILSANIGCITHLQAGTATPVRH WIEAIDARLNGFPI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcF | CAE85243.1 | GlcF protein | Not tested | PAI V 536 | Protein | 9e-110 | 56 |
