Gene Information

Name : fecI (azo2373)
Accession : YP_933877.1
Strain : Azoarcus sp. BH72
Genome accession: NC_008702
Putative virulence/resistance : Virulence
Product : RNA polymerase ECF-subfamily sigma-70 factor
Function : -
COG functional category : K : Transcription
COG ID : COG1595
EC number : -
Position : 2612445 - 2612945 bp
Length : 501 bp
Strand : +
Note : FecI: belongs to the extracytoplasmic-function (ECF) sigma factor, which represent a subgroup of the sigma 70 family. The sigma factor is an initiation factor that promotes attachment of the RNA polymerase to specific initiation sites and then is released

DNA sequence : 
ATGCCTCCGTCAGCGGACTTGAACTTCGGCAACATCTACGGCACCCATCACAACTGGCTGCAGGGCTGGTTGCGGCGCAG
GCTGGGTTGCGCGCTCGACGCGGCCGATCTTGCCCACGATACGTTCCTGCGCGTACTGGCCGGGCGCGAATTGACCGACA
TCCGTGAGCCGCGCGCCTATCTCACCACCGTCGCCCACGGGCTGATGGTGAATCATCTGCGCCGCCGCGACATCGAGCGC
GCATGCCTGGACGCGCTCGCCAGCCTGCCGGAGCCCCTGGCGCCGAGCCCCGAGGCGCGCGCGCTGGCCGTTGAACTGCT
GCTGGAAATCGATGCGATGCTCGACGGCCTGTCCCGCAAGGCCCGCACTGCCTTCCTGTTATCGCAGCTGGAGGGGCTGA
CCTACGCCGAAATCGCGGAACAGCTGGGCGTTTCGGTCAGCATGGTGCGCAAGTACATGCTGCAGGCCATCACCCACTGC
CTGCAGATCCGGCAGGCGTGA

Protein sequence : 
MPPSADLNFGNIYGTHHNWLQGWLRRRLGCALDAADLAHDTFLRVLAGRELTDIREPRAYLTTVAHGLMVNHLRRRDIER
ACLDALASLPEPLAPSPEARALAVELLLEIDAMLDGLSRKARTAFLLSQLEGLTYAEIAEQLGVSVSMVRKYMLQAITHC
LQIRQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 1e-35 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fecI YP_933877.1 RNA polymerase ECF-subfamily sigma-70 factor VFG1049 Protein 6e-36 54