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Name : ccmF (azo3930) Accession : YP_935432.1 Strain : Azoarcus sp. BH72 Genome accession: NC_008702 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 4307994 - 4309970 bp Length : 1977 bp Strand : - Note : Cytochrome c-type biogenesis protein ccmF. Homology to ccmF of E. coli of 63% (sprot|CCMF_ECOLI). REQUIRED FOR THE BIOGENESIS OF C-TYPE CYTOCHROMES. POSSIBLE SUBUNIT OF A HEME LYASE. Tigrfam: nerF: cytochrome c-type biogenesis protein ccmF Pfam: Cytochrom DNA sequence : ATGATTCCCGAACTCGGACATTTCGCGCTGGTGCTGGCCTTGGTGCTGGCGCTGGTGCAGGCGGTGGTGCCGCTGGTGGG CGCGCAGCGCAACCGGCTGGCGCTGATGGCGGTGGCGCGGCCCGCGGCGCAGGGGCAGTTCTTCTTCGTCGCGCTGTCGT TCGTACTGCTGACCTGGGCCTTCGTGGTCAATGACTTCTCGGTGCAGTACGTGGCGATGCATTCCAACACCGCCACGCCG CTCGCCTACCGCATCACCGCGGTGTGGGGCAGCCACGAGGGCTCGCTGCTGCTGTGGGCGCTGACGCTGACGCTGTGGAC GGTGGCGGTGACGGTATTCTCGCGCCACCTGCCGGAAGCCTTCGTTGCCCGCGTGCTCGGCGTGCTCGGCTGCATCAGCG TCGGCTTCCTCGCCTTCATGCTGGTCACCTCCAACCCGTTCGACCGCCTGCTGCCGGGCGCGCCCGAGGGCCGCGACCTG AACCCGCTGCTGCAGGACCCGGGCATGATCATCCACCCGCCGCTGCTGTACATGGGCTACGTCGGCTTCTCGGTGGCCTT CGCCTTCGCCATCGCCGCGCTGCTCAGCGGCCGGCTCGACGCCGCGTGGGCGCGCTGGTCGCGGCCGTGGACCACCATCG CCTGGGTCTTCCTCACCGCCGGCATCACCGTCGGCTCGGGCTGGGCCTATTACGAACTCGGCTGGGGCGGCTGGTGGTTC TGGGACCCGGTGGAAAACGCCTCCTTCATGCCCTGGCTGCTCGGCACCGCGCTGATCCACTCGCTGGCGGTCACCGAAAA GCGCGGCGCCTTCCGCAGCTGGACGGTGCTGCTGGCGATCGGCGCGTTCTCGCTGTCGCTGCTCGGCACCTTCCTGGTCC GTTCGGGCGTGCTCACCAGCGTGCATGCCTTCGCCACCGATCCGCGCCGCGGCCTGTTCGTGCTCGCCTTCCTCGTCACC GTGATCGGCGTGTCGCTGGTGCTCTACGCCTGGCGCGCGCCCCGGCTGGCGGGCGGCGGCCGTTTCGGCCTGGTGTCGCG CGACACCTCGCTGCTCGGCAACAACGTGCTGCTGTCGGTGGTATCGGCCTCGGTGCTGCTCGGCACGCTCTACCCGCTGT TCCTCGATGCGCTCGGCCTGGGCAAGATCTCGGTCGGCCCGCCGTACTTCGAGGCGGTGTTCGTGCCGCTGATGACGCCG GTGGTCATCCTGATGATGTTCGGCCCCTTCCTGCGCTGGAAGAACGACGACCTCGGCGCCGCGGTGCGCCGCGTGGCGCC GGCCTTCATCGCCAGCGTGGTGATCGGCGTGGGCGCCGCGTTCGCGATCGGCCATGTCACCTGGCGCACCGTGCTCGGCC TTGCGCTCGCCGCGTGGGTGGTGCTGGCCAGCCTCCAGCTGCTGGTCTCGCGCCTGCGCGAACGCGCCGGCGCGGCGGTG TCGTCGCGGCTCTCCACCATCCCGGCGGCGTGGTGGGGCATGTGGCTGGCGCACCTCGGCGTTGGCGTGTTCATCATCGG CGTCACCCTGGTCGGCAGCCTCGAGCAGAACCTGGACCTCAAGATGCGCCCGGGCGAGCAGGCGGAGTTCGCCGGCTACA CGCTGGCCTTCCGCGGCGTGCAGGAGATCGAAGGCCCCAACTACGATGCCGCGCGCGCCAACATCGTGATGTCGCGCGGG GGCGTCGAACTCAACACGCTGGAGCCGGAAAAGCGCGTCTATCGCGCGCAGCAGATGCCGATGACCGAAGCCGCGCTCGA CGTCGGCCTGTTCCGCGACATCTACGTCTCGCTCGGCGAAGGCCTGAAGGACGGCAGCTGGATCGTCAGCCTGCACTACA AGCCCTTCATCAGCTGGATCTGGGCCGGCTGCCTGCTGATGGTCGCGGGCGGCATCTGCGCCGCGGCCGACCGCCGTTAT CGCAAGCTCGCCGAGCGCAGCGCCGCGGCGGCGGCCACCGCCGGCCAGACCGCCTGA Protein sequence : MIPELGHFALVLALVLALVQAVVPLVGAQRNRLALMAVARPAAQGQFFFVALSFVLLTWAFVVNDFSVQYVAMHSNTATP LAYRITAVWGSHEGSLLLWALTLTLWTVAVTVFSRHLPEAFVARVLGVLGCISVGFLAFMLVTSNPFDRLLPGAPEGRDL NPLLQDPGMIIHPPLLYMGYVGFSVAFAFAIAALLSGRLDAAWARWSRPWTTIAWVFLTAGITVGSGWAYYELGWGGWWF WDPVENASFMPWLLGTALIHSLAVTEKRGAFRSWTVLLAIGAFSLSLLGTFLVRSGVLTSVHAFATDPRRGLFVLAFLVT VIGVSLVLYAWRAPRLAGGGRFGLVSRDTSLLGNNVLLSVVSASVLLGTLYPLFLDALGLGKISVGPPYFEAVFVPLMTP VVILMMFGPFLRWKNDDLGAAVRRVAPAFIASVVIGVGAAFAIGHVTWRTVLGLALAAWVVLASLQLLVSRLRERAGAAV SSRLSTIPAAWWGMWLAHLGVGVFIIGVTLVGSLEQNLDLKMRPGEQAEFAGYTLAFRGVQEIEGPNYDAARANIVMSRG GVELNTLEPEKRVYRAQQMPMTEAALDVGLFRDIYVSLGEGLKDGSWIVSLHYKPFISWIWAGCLLMVAGGICAAADRRY RKLAERSAAAAATAGQTA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 1e-151 | 59 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 1e-115 | 55 |
