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Name : secD (azo0904) Accession : YP_932408.1 Strain : Azoarcus sp. BH72 Genome accession: NC_008702 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 967876 - 969750 bp Length : 1875 bp Strand : - Note : part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of DNA sequence : ATGAATCGCTATCCGCTCTGGAAGAACATCCTCATCGGTCTCGCCCTGCTGTGGGGCCTGATCTACACCTTGCCGAACTT CTACGGCGAGGTTCCGGCGGTCCAGGTCTCCAGCGCAAAGGCCACGCTCAAGCTCGAACCGGCCAGCGTGACCGACCGCG TCGCCGCGATCCTGCAGGGCGCCGGCATCGAGCACGACGGCATTTTCGCGGACGCCAACAGCGTGCGCGCCCGCTTCGCC AGCACCGAACTCCAGCTGCGGGCCAAGGACGCGATCGAACGCGCGTTCAACACCGACCCGCAGGATCCCTCCTACGTCGT CGCACTCAACCTGCTGTCGGCCTCGCCATCCTGGCTCACTTCCATCCACGCGCTGCCGATGTACCTTGGCCTCGACCTGC GGGGCGGCGTGCATTTCCTGCTGCAGTTGGACATGCCCGGTGCGTTGCTCAAGCGCCTGGACGCGCTGTCGGGCGACCTG CGCACGCTGATGCGCGACAAGAACGTGCGCCACGCCGGCATCACGCGCGAAGGCACCACGGTCGTCATCCGCTTCCGTGA AGCGGCGCAGCGCGAGGCCGCCCGCTCGGCCATCCAGGGCAGCACCGCCGACCTGCAGCTGGTCGACCGCGACGACGGCA GCGAGGACCTCAAACTGATCGCGACGCTGACGCCCCAGGCGCAGCAGACCATGCGTGAATACGCGATCAAGCAGAACATC TCGACGCTGCACAACCGCATCAACGAACTCGGCGTCGCCGAGCCGGTGATCCAGCAACAGGGCGCGGAACGCATCGTCGT CCAGCTGCCCGGCGTGCAGGACGTCGCCAAGGCCAAGGACATCCTCGGCCGCACCGCCACGCTGGAAGTGCGCATGGTCG ACGACACCCCGGGCGCGCTGGAACAGGCCCTCACCGGCAACGTGCCCTTCGGCACCGAGCTGTACCGCGAGCGCGGCCGC GGCCCGCTGCTGGTGAAGAAGCAGGTCGTCCTCACCGGCGAGCGCCTGACCGACGCCCAGCCCGGCTTCGACGGCCAGAC CAACGAAGCCGCGGTCCACCTCACGCTCGACGCCGCGGGCGCCCGCATCTTCCGCGACCTCACGCGCGAGAACGTCGGCA AGCGCATGGCCATCCTGCTGATCGAGAAGGGCAAGGGCGAGGTGGTCACCGCCCCGGTGATCCGCACCGAGATCGGCGGC GGCCGGGTGCAGATTTCTGGCAGCATGAACACCGTCGAAGCCAACGACGTCGCGCTACTGCTGCGTGCAGGCAGCCTGGC CGCGCCGATGGAGATCATCGAGGAACGCACCGTAGGCCCCAGCCTCGGCGCCGAGAACATCGCCAAGGGCTTCCACTCCA CGCTGTGGGGCTTCGTCGCGATCGCGGTGTTCATGTGCGTCTACTACGCGGTGTTCGGTCTGGTCTCCACGCTGGCGCTC GCCGCCAACCTGCTGCTGCTTGTGGCGCTGCTGTCGCTGCTGCAAGCCACGCTGACGCTGCCCGGCATCGCCGCGATGGC GCTGGCGCTCGGCATGGCGATCGACGCCAACGTGCTGATCAACGAGCGCATCCGCGAGGAACTGCGCAACGGCGTCAGCC CGCAGGCCGCGATCGCAGCCGGCTATGACCGCGCCTTCAGCACCATTCTGGACTCCAGCGTCACCAGCCTGATCGCCGGT ATCGCGCTGCTGGTGTTCGGCTCCGGCCCGGTGCGCGGCTTCGCGGTGGTTCACTGCCTGGGTCTGCTGACCTCGATGTT CAGCGCGATCCTGGTGTCGCGGATGCTGATCAACCTGATCTACGGCCGTCGCCGCAAGATCGACAAGCTTGCCATCGGCC AGGTGTGGAAGCCCGGCAACGTCGCCGGCAACTGA Protein sequence : MNRYPLWKNILIGLALLWGLIYTLPNFYGEVPAVQVSSAKATLKLEPASVTDRVAAILQGAGIEHDGIFADANSVRARFA STELQLRAKDAIERAFNTDPQDPSYVVALNLLSASPSWLTSIHALPMYLGLDLRGGVHFLLQLDMPGALLKRLDALSGDL RTLMRDKNVRHAGITREGTTVVIRFREAAQREAARSAIQGSTADLQLVDRDDGSEDLKLIATLTPQAQQTMREYAIKQNI STLHNRINELGVAEPVIQQQGAERIVVQLPGVQDVAKAKDILGRTATLEVRMVDDTPGALEQALTGNVPFGTELYRERGR GPLLVKKQVVLTGERLTDAQPGFDGQTNEAAVHLTLDAAGARIFRDLTRENVGKRMAILLIEKGKGEVVTAPVIRTEIGG GRVQISGSMNTVEANDVALLLRAGSLAAPMEIIEERTVGPSLGAENIAKGFHSTLWGFVAIAVFMCVYYAVFGLVSTLAL AANLLLLVALLSLLQATLTLPGIAAMALALGMAIDANVLINERIREELRNGVSPQAAIAAGYDRAFSTILDSSVTSLIAG IALLVFGSGPVRGFAVVHCLGLLTSMFSAILVSRMLINLIYGRRRKIDKLAIGQVWKPGNVAGN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 7e-85 | 44 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 1e-84 | 43 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 1e-84 | 43 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 1e-84 | 43 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 1e-84 | 43 |
