Gene Information

Name : cysB (Ping_1979)
Accession : YP_943346.1
Strain : Psychromonas ingrahamii 37
Genome accession: NC_008709
Putative virulence/resistance : Unknown
Product : transcriptional regulator CysB
Function : -
COG functional category : K : Transcription
COG ID : COG0583
EC number : -
Position : 2408696 - 2409667 bp
Length : 972 bp
Strand : -
Note : LysR-type transcriptional regulator; contains helix-turn-helix (HTH) motif; in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon; autoregulates expression; crystal structure of Klebsiella aerogenes

DNA sequence : 
ATGAAATTACAACAATTACGTTATATCGTCGAAGTTTTAAATAATAATCTAAATGTATCTGCAACGGCTGAGAATTTGTA
CACGTCGCAGCCGGGGATAAGTAAGCAAGTTCGCATGTTGGAAGATGAATTGGGGATTCAAGTTTTTGAACGAAGCGGAA
AACATTTAACTAAGGTAACCCCTGCAGGGAAAGAGGTTATTCGTTATGCTTCTGAGATACTGGGTAAAGTTGAAAGTATC
AAAGCCATTGCTTGCCAATATACTCAGCCTGATCAGGGAACGTTAAATATTGCCACAACCCATACTCAGGCGCGTTATGC
TTTACCGGATGTTATTCAAGGGTTTATAAAACGCTATCCAAAAGTGTCGCTGCATATGCATCAGGGGACCCCGACGCAAA
TAAGCGAGTCAGTCGCCAAAGGGAAAACCGATTTTGCAATTGCAACTGAAGCACTGCATCTCTATCAAGATTTGATTATG
TTACCTTGTTACCATTGGAATCGTTCGGTGATTGTGCCTAAAGAGCATCCTCTGGCGAATATTAAAGAGATTAGCATTGC
AGATATTGCCAAGTACCCGATTGTGACTTATGTTTTTGGTTTTACCGGACGTTCGGAGTTAGATGAAGCATTTAACTCTG
CGGGATTTAAACCTAATGTTGTCTTTACTGCAACCGATGCTGATGTGATAAAAACCTATGTGCGTTTAGGATTGGGTGTT
GGGGTTGTTGCCAGTATGGCCATTAATGAAGATGATGACGATTTTTGCGTGATTGATGCGCGTCATATTTTCAAATCAAG
CACCACCAGTATTGGTTTCAGAAAGGGCTCTTTTTTACGTGATTATATGTATGATTTTATGGTTCGATTTGCACCCCATT
TGAATCGTCCACTGGTAGAAAAAGCGATTCAGTTAAAATATAACGCTGAAGTCAGTCAATTATTTAAAGATATTGAACTG
CCTGTGCGCTGA

Protein sequence : 
MKLQQLRYIVEVLNNNLNVSATAENLYTSQPGISKQVRMLEDELGIQVFERSGKHLTKVTPAGKEVIRYASEILGKVESI
KAIACQYTQPDQGTLNIATTHTQARYALPDVIQGFIKRYPKVSLHMHQGTPTQISESVAKGKTDFAIATEALHLYQDLIM
LPCYHWNRSVIVPKEHPLANIKEISIADIAKYPIVTYVFGFTGRSELDEAFNSAGFKPNVVFTATDADVIKTYVRLGLGV
GVVASMAINEDDDDFCVIDARHIFKSSTTSIGFRKGSFLRDYMYDFMVRFAPHLNRPLVEKAIQLKYNAEVSQLFKDIEL
PVR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cbl YP_853089.1 transcriptional regulator Cbl Not tested PAI IV APEC-O1 Protein 4e-61 42