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Name : Ping_2212 (Ping_2212) Accession : YP_943552.1 Strain : Psychromonas ingrahamii 37 Genome accession: NC_008709 Putative virulence/resistance : Unknown Product : protein-export membrane protein SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 2694386 - 2696248 bp Length : 1863 bp Strand : - Note : TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecD; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: vpa:VP0590 protein-export membrane protein SecD DNA sequence : GTGTTAAATAAATACCCTATGTGGAAGTATTTGCTGCTTTTATTTATAGTTTTCATCAGTTTACTTTATGCAGCTCCGAA TCTATACGGAGAAGATCCTGCCGTTCAAATATCTGCTACCCGTGGTGCAAAAGTCGAGCTTTCGACGTTGGGCGACGTTC AAGATATTCTTAAACAGTCAAATATCATTCCTAAAAGTGCCGTTCTTGAAAATGATCAGCTTTTAATTCGTCTAAAATCC AGTGAAGATCAATTATTAGCGCGTGAAACCATTATTGAAAAATTAGAGGGCGATTTTGTTACTGCGCTTAATTTGGCGCC TTCAACACCTGCCTGGTTAGAAGCTATTGGTGCCGGGCCACTAAAATTAGGCCTTGATTTACGCGGCGGTGTTTATTTTC TGATGGAAGTGGATATGGATGAGGCCGTCAGTAAAGCACAAGAGCAAATGGTGCAGGATTTACGTGGCGATTTACGGACA GAAAAAATAAGATTTCGTGGTATCACTAAAGCGAATAGCGCAACGGGTGTACTTGTAACATTCACTGAGCAATCAATTTT GGACAGTGCCATTGACTATTTAAAACCTAATAATCCAGGTTACCAATTTTCTGAATCCGTTGATAATGGCCGTTATATTC TATCTATTGAAATGACGGAGCAGAAATTGCAGGCGAGCAAAGAGTACGCTCTGCAGCAAAATTTGACTATTCTTCGTAAC CGAGTTAATGAACTTGGCGTTGCTGAACCTTTAGTTCAACGGCAAGGTACGGACAGAATTGTTGTTCAATTACCGGGTAT TCAAGATACGGCACGTGCAAAAGAGATCCTGGGTGCAACGGCTACACTTGAGTTTCATGCAGTAGACTCAGAAACAAATA TTAATGATGCATTAGCAGGACGTTTGCCTTCTTCATCAATTGTTTATAAGGAGAGAGATGGTCGCCCTGTCGTGGTTAAA AAACAGATTATTTTAACTGGTAACCATATCGTGGATGCACAATCGGGCAGTGATGATATGGGGCGTCCTCAGGTTAGTAT CTCACTTGATTCGCAAGGTGGCAGCATGATGTCCCGTTTTACCAAAAATAATATTGGTAAACCAATGGCTACCCTGTTTA TTGAGTATTTACCGACAGGTAAGAAAAAACCGAACGGTAAGGCTATTATTGAAAAGCGTGAAGAAGTTGCCAATGTAGCC ACTATTCAAGCGCAGCTTGGCCGTAGTTTTCGTATTACCGGACTTGATAACGCGGCAGAAGCACATAATCTGGCGCTATT ACTGCGCGCCGGTGCGCTTATTGCACCTATTCAAATCGTCCAGGAACGTACTATTGGACCGAGTTTAGGACAAGAAAATA TAGATAACGGCATTAAGGCAATGGTCTATGGCATGCTTGCTGTTGTCTTGTTTATGTTTGTTTATTATCGAAAATTTGGG GTTATCGCCAATACGGCTTTGCTCTTCAATATCGTTATGATTATCGGTTTTATGTCTATGATCCCAGGGGCTACATTAAC CTTACCTGGCATTGCCGGTATTGTCTTGACTGTGGGTATGGCCGTTGATGCGAATGTGCTTATATTTGAAAGAATTAGAG AAGAATTAGCTGCTGGAAAATCAATCCAACAAGCAATTCATGAAGGCTATTCTAATGCATTTTCTACTATAGCGGATGCG AATATTACTACTTTCATAACAGCATTAATTTTGTTTGCTGTGGGTACCGGACCAATTAAAGGTTTCGCTGTTACGCTCGC GATTGGTATTGCGACTTCTATGTTTACTTCTATTTTTGGAACACGCGCTATTGTAAACGCTGTCTGGGGTGGTCGTAATG ATATTAAGAAACTATCAATCTAG Protein sequence : MLNKYPMWKYLLLLFIVFISLLYAAPNLYGEDPAVQISATRGAKVELSTLGDVQDILKQSNIIPKSAVLENDQLLIRLKS SEDQLLARETIIEKLEGDFVTALNLAPSTPAWLEAIGAGPLKLGLDLRGGVYFLMEVDMDEAVSKAQEQMVQDLRGDLRT EKIRFRGITKANSATGVLVTFTEQSILDSAIDYLKPNNPGYQFSESVDNGRYILSIEMTEQKLQASKEYALQQNLTILRN RVNELGVAEPLVQRQGTDRIVVQLPGIQDTARAKEILGATATLEFHAVDSETNINDALAGRLPSSSIVYKERDGRPVVVK KQIILTGNHIVDAQSGSDDMGRPQVSISLDSQGGSMMSRFTKNNIGKPMATLFIEYLPTGKKKPNGKAIIEKREEVANVA TIQAQLGRSFRITGLDNAAEAHNLALLLRAGALIAPIQIVQERTIGPSLGQENIDNGIKAMVYGMLAVVLFMFVYYRKFG VIANTALLFNIVMIIGFMSMIPGATLTLPGIAGIVLTVGMAVDANVLIFERIREELAAGKSIQQAIHEGYSNAFSTIADA NITTFITALILFAVGTGPIKGFAVTLAIGIATSMFTSIFGTRAIVNAVWGGRNDIKKLSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 1e-121 | 48 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 1e-121 | 48 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 6e-122 | 48 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 1e-121 | 48 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 1e-121 | 48 |
