Gene Information

Name : Ping_0303 (Ping_0303)
Accession : YP_941768.1
Strain : Psychromonas ingrahamii 37
Genome accession: NC_008709
Putative virulence/resistance : Unknown
Product : malate synthase G
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG2225
EC number : 2.3.3.9
Position : 397705 - 399873 bp
Length : 2169 bp
Strand : +
Note : catalyzes the formation of malate from glyoxylate and acetyl-CoA

DNA sequence :
ATGAATTTACCACAACAAAAACAGAGTGAAATTGAGTCAGGTTTTTACAATTTCATCAATCAAGAAGTACTGCCACATAC
AAATTTGAATGCTGATGATTTCTGGTTTGACTTAATGAAATTGGTCAACGATTTTTCACCACTTAATTCGCAGTTATTAG
CCACGCGTAAAACAATGCAGAAGCAGATTGATGATTGGCATCGGTCGCATCAGAACTTTGATCAACAGGACTACCTGAAA
TTTTTAGAAGAAATCGGTTATTTAGTTGAGCAGGGCGAGTCCTTTAATATCGAAACAGAGAATGTGGACAGTGAAATATC
CACATTAGCAGGACCGCAACTGGTTGTACCGGTACAAAATGCACGCTTTGCATTAAATGCTGCCAATGCCAGATGGGGCA
GTTTATACGATGCCTATTACGGCACTGATCTTATCCAGAAAACCGGCGCGTTAAAACCCGGTTCTGACTTTAATGTAGCC
CGCGGCCAACGTGTGATTACCTTAGCTAAAGACTTTCTTGATGAGGTGTTCCCGCTGGATAGCGGCTCGCACCATGATGT
TTTAAGCTATTTAGTTTATTACCAGCATCTTCTGGCTTTTTTCCCGGATGGCAGTAAAACCGGCTTAAAAACCCCCGCTC
AGTTTATTGCATTGGATGGTTCGAAAAGCGATCCGAGTTATCTTCTGCTGAAAAACAATGGCTTACATATTGGCATTGTG
ATTGATCGCCACGGTAAAATTGGCTGTTCAGATCTTTCCGGCATTGATGATATTCAAGTTGAATCTGCTTTGACGACTAT
CATAGATTTTGAAGACTCGATTTCTGCTGTGGATGCTGAGGATAAAGTTGAAGCCTACAAAAACTGGCTGGGTTTAATCA
AAGGTGATTTAAGCGCAAATTTCAGCAAAGACGGCGAGCAGATGACACGGCAGCTTAATCAGGACAAAGCCTTCATCGAC
AAAGACGGTGAGAAATATGTTGTTCACGGACGAGCCTTGCTACTAGTGCGTAATGTTGGTCACTTAATGGGCAGCGATTT
AATCCAGGACAGTGAGGGCAACAATGCTCCCGAAGGTATTATTGATGCTGCGATTACCGCGTTAATCGGCAGTATCGATT
TACAGGAAAAAACGAATAATAATATCCGCAATAGTCGTAGCGGCAGCATCTATATTGTTAAACCTAAAATGCATGGGCCG
GACGAAGTCGCTTTCACCTGTGACTTGTTCAGCCGCGTGGAAGAGATGCTTAAACTGCAGCCTAATACCATTAAACTGGG
CATTATGGATGAAGAACGCCGTACATCGGCAAATCTCAAAGAGTGTATTCGGGTAGCAAAATCACGGGTGGTCTTTATTA
ATACCGGTTTCTTAGACAGAACCGGTGATGAAATCCATACCAGTAAAGAAGCGGGTGCTGTTTATCCTAAAGCGCTGATC
AAAACCCTGCCCTGGTTTGATGCTTACGAAAATAACAATGTAGATGTTGGACTCGCCTGTGGATTCTCTGGAAAAGCGCA
GATTGGTAAAGGCATGTGGGCAATGCCCGATGAAATGAAAAAAATGATGAAGGAAAAAATTCAACATCCTTTATCGGGTG
CCAATACCGCTTGGGTACCGTCGCCTACCGCCGCGATATTACATGCTTTACATTATCACCAGGTGGATGTTTTTAAAGAA
CAGCTGAAAATAGCGAAGCGCCCGGCTGCCAAGCAGACGGATTTGTTAACTCTTCCTATTATGCCGAGTGATTATCCCTT
GTCGTTGGAAGAGATTGAAAAAGAGTTAGAAAACAATATTCAGGGCATTTTAGGTTACGTGGTGCGTTGGGTTGAAATGG
GGATAGGCTGTTCAAAAGTACCTGATATTAACAATGTCGGATTAATGGAGGATCGCGCTACCTTGCGTATTTCAAGTCAG
CATATTGCCAACTGGTTAAAACATAATATATGCAGCACTGAACAAGTAAATCGTATTATGCGCAATATGGCAGAAATTGT
AGATAAACAAAATGCAGGGGTATCTGGTTATCAGAACATGTCTCCTAATTATGAAACAAATTACGCATTTCAGGCCGCAG
AAGCGTTGATTTTTGAAGGTGAAGATCAACCCAATGGATATACAGAGCCGTTATTACATGAGTACAGAATGTTCGCAAAA
ATTTCCTAG

Protein sequence :
MNLPQQKQSEIESGFYNFINQEVLPHTNLNADDFWFDLMKLVNDFSPLNSQLLATRKTMQKQIDDWHRSHQNFDQQDYLK
FLEEIGYLVEQGESFNIETENVDSEISTLAGPQLVVPVQNARFALNAANARWGSLYDAYYGTDLIQKTGALKPGSDFNVA
RGQRVITLAKDFLDEVFPLDSGSHHDVLSYLVYYQHLLAFFPDGSKTGLKTPAQFIALDGSKSDPSYLLLKNNGLHIGIV
IDRHGKIGCSDLSGIDDIQVESALTTIIDFEDSISAVDAEDKVEAYKNWLGLIKGDLSANFSKDGEQMTRQLNQDKAFID
KDGEKYVVHGRALLLVRNVGHLMGSDLIQDSEGNNAPEGIIDAAITALIGSIDLQEKTNNNIRNSRSGSIYIVKPKMHGP
DEVAFTCDLFSRVEEMLKLQPNTIKLGIMDEERRTSANLKECIRVAKSRVVFINTGFLDRTGDEIHTSKEAGAVYPKALI
KTLPWFDAYENNNVDVGLACGFSGKAQIGKGMWAMPDEMKKMMKEKIQHPLSGANTAWVPSPTAAILHALHYHQVDVFKE
QLKIAKRPAAKQTDLLTLPIMPSDYPLSLEEIEKELENNIQGILGYVVRWVEMGIGCSKVPDINNVGLMEDRATLRISSQ
HIANWLKHNICSTEQVNRIMRNMAEIVDKQNAGVSGYQNMSPNYETNYAFQAAEALIFEGEDQPNGYTEPLLHEYRMFAK
IS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcB CAE85241.1 GlcB protein, malate synthase G Not tested PAI V 536 Protein 9e-168 54