|
Name : Ping_0499 (Ping_0499) Accession : YP_941953.1 Strain : Psychromonas ingrahamii 37 Genome accession: NC_008709 Putative virulence/resistance : Unknown Product : lytic transglycosylase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1388 EC number : - Position : 633551 - 635125 bp Length : 1575 bp Strand : + Note : PFAM: Peptidoglycan-binding LysM; Lytic transglycosylase, catalytic; MLTD_N domain protein; KEGG: pha:PSHAa1967 lytic murein transglycosylase C, membrane-bound DNA sequence : ATGAAATTTTTTCTGTCGGTTTTTATTCTGTTTTTTGTTACCGCCTGTACTAGTACAGGTGAGTTGGCTGGGCCCGAACC CTCCAGAAAAAACATTGAAGAGCTACAACAAGAGATGTTCAGTCGGTCTGCCGAATGGAGAACGGCACCTTTTATGGACG AAAAGTCCCTTCCCGAAAGTTATGATAATCTTTGGTTAAAGTTAGCTGAAGGTTTTGAATTTGAAGTGCCTCAAAACGCG CGTGTCGCTAAACAACGGGATTATTTTTTAAAGCATCCAAATCACCTGGCGGAAGTTTCAAAACGAGCAGAACCTTTTTT ATATCTGATTATTGAACAAATAGAAGCAAAAAACTTACCCCTTGAACTTGCTTTATTACCTGTTGTAGAAAGTACTTTTA ATCCCTTTGCTTATTCGCAGAGTCATGCTTCCGGTTTGTGGCAATTTATGCCGGCCACAGGGGTACGATTCGGATTAACT CAAGACTGGTGGTACGACGGTCGTCGCGACGTTTATGCTTCAACAGATGCAGCTTTAACCTATATGGATATATTACATAA CTATTTAAATGAAGACTGGTTACATGCACTCGCGGCCTATAACTCTGGAGAAGGGCGGGTAGAAAGAGCGGTTCGCGCTA ATAAGAAATACAATAAACCGACAGATTACTGGCATTTGTCCTTGCCAATAGAGACGCAAGAGTACGTCCCAAAGCTATTA GCTTTAGTTGATATTTTACGTAACCACAAAAAGTATGGTATTGAGCTGCCAGTGATAGCAAATAAGCAGGTACTGACTTA CGTAGATACCGGTTCGCAACTAGATCTTGCTTATGCGGCAGAATTGGCCGAGTTATCACCTGACGATCTTCAGTTATTAA ATCCCGCTTATAATCGCTGGGTAACTTCACCAAACGGTCCTCACCGATTACTTATCCCGACAAAAATTGCACAGCAGTTT AGTCAAAAATTGGCTAATACGGCGCAAAATAAGCGCACCAGATGGTCTCGTTATACTGTGCAGTCAGGTGATAACCTGGG GTTCATTGCGCGCGAAAATTATACAACGATAAATATTCTTAAACAGGTTAACAACCTTGATAGTGCATTTATAAAAATAG GACAGCCTTTACTTATTCCGTTTGCAAGTGAGGCCCAGAAGGATGATTTTTCTCGTCAGGCGAGGCGCTTTGAAGGTCAA CAAGCCTCTGCAAACAAAACAAAAAAGAAAGTTATCTACACAGTAAGTGAAGCTGATACGCTCTGGGATATTAGTCGTGA CTTTAATGTGAGGGTTAAAGAGATTGCCAAATGGAATACAATCAATAGTACAGAACCGTTACAGTTGGGGCAAAAATTAA CCGTTTGGAAAGCGATTAAATCCACACCCAATAAAAACGATACTCACCGTATGACCTATCAGGTACGCGCCGGAGACTCT CTTCACCTGATTGCATCAAAATTTAATGTAAAGCTCGTCGATTTAGTGCGTTGGAATGAGTTGAATAAAGGTGAATATAT TCAGCCGGGGCAAAAATTAGAACTCTATGTTGCAGTGCAAAAATCTCGGACTTAA Protein sequence : MKFFLSVFILFFVTACTSTGELAGPEPSRKNIEELQQEMFSRSAEWRTAPFMDEKSLPESYDNLWLKLAEGFEFEVPQNA RVAKQRDYFLKHPNHLAEVSKRAEPFLYLIIEQIEAKNLPLELALLPVVESTFNPFAYSQSHASGLWQFMPATGVRFGLT QDWWYDGRRDVYASTDAALTYMDILHNYLNEDWLHALAAYNSGEGRVERAVRANKKYNKPTDYWHLSLPIETQEYVPKLL ALVDILRNHKKYGIELPVIANKQVLTYVDTGSQLDLAYAAELAELSPDDLQLLNPAYNRWVTSPNGPHRLLIPTKIAQQF SQKLANTAQNKRTRWSRYTVQSGDNLGFIARENYTTINILKQVNNLDSAFIKIGQPLLIPFASEAQKDDFSRQARRFEGQ QASANKTKKKVIYTVSEADTLWDISRDFNVRVKEIAKWNTINSTEPLQLGQKLTVWKAIKSTPNKNDTHRMTYQVRAGDS LHLIASKFNVKLVDLVRWNELNKGEYIQPGQKLELYVAVQKSRT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mltD | AAO17227.1 | MltD | Not tested | tcd island | Protein | 1e-55 | 42 |
