Gene Information

Name : AAur_4130 (AAur_4130)
Accession : YP_949797.1
Strain : Arthrobacter aurescens TC1
Genome accession: NC_008711
Putative virulence/resistance : Unknown
Product : transketolase subunit B
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG3958
EC number : -
Position : 4512437 - 4513432 bp
Length : 996 bp
Strand : -
Note : identified by match to protein family HMM PF02779; match to protein family HMM PF02780

DNA sequence :
ATGAGCACAGTTACCACCAAAGCAAAGCTCAAGACCTCTGCCATGATCGCGTCCTTCGCTGATCCTGGCCAAAAGACCAC
CTCCGCTCCCTTTGGGCATGCGCTGGTCAAAGCCGCCGAGGCTGATTCCCGGATCGTGGGCCTGACCGCGGACCTCGGCA
AGTACACGGACATGCACATCTTCGCCAAGGCCCTCCCGGAACGGTTCTTCCAGATGGGAATGGCCGAGCAGCTCCTGTTC
GGTGCGGCCGCAGGCATGGCCGAGACCGGGCTGATCCCGTTCGCTTCCACGTACTCGGTGTTCGCGGCCCGGCGTGCGTA
TGACTTCCTGTGCCTCGACATCGCCGAGCCCAATCTGAACGTCAATATCATCGGCGGGCTCCCAGGCCTAACCACCGGCT
ACGGACCCAGCCACCAGGCCACCGAGGACATGGCGATCTTCCGCGGCATGCCTAACCTCACCATCGTGGACCCCTGTGAC
TCCGTGGACATCGAGCAGGCTGTTCCCCAGCTTGCGGCCTCCGATGGGCCCACGTACCTGCGCTTGCTGCGCGGCAACGT
GCCCACGGTCCTGGATGAGTACGACTACACATTCGAGCTCGGCAAAGCCAAAGTCCTCCGTGGCGGCAACGATGTGGTGT
TCGTTTCCTCCGGCCTGATGACCATGCGTGCGCTGCAGGCCGCGGATGCGTTGGCTGCCCATAACGTGGATGTGGCCGTG
GTGCACACGCCCACCATCAAACCCTTCGACTCGGCCACCGTACTCGCGGAGCTGAACACCGGCCGGCTTGCTGTCACGCT
GGAGAACCACACCGTTGTCGGCGGTCTGTTCGAAACTGTTGCGTCCGCCGTCGTCACCGCCGGTCTCGGCAAGCGCGTGG
TTCCCATCGCGCTTCCGGACCAATTCCTCGACGCCGGTGCGCTGCCGACGCTGCACGAGCGCTACGGACTGTCCGTGGAC
CGGATAGTGGCCAAGGTGCTGGCGGAACTCGGCTGA

Protein sequence :
MSTVTTKAKLKTSAMIASFADPGQKTTSAPFGHALVKAAEADSRIVGLTADLGKYTDMHIFAKALPERFFQMGMAEQLLF
GAAAGMAETGLIPFASTYSVFAARRAYDFLCLDIAEPNLNVNIIGGLPGLTTGYGPSHQATEDMAIFRGMPNLTIVDPCD
SVDIEQAVPQLAASDGPTYLRLLRGNVPTVLDEYDYTFELGKAKVLRGGNDVVFVSSGLMTMRALQAADALAAHNVDVAV
VHTPTIKPFDSATVLAELNTGRLAVTLENHTVVGGLFETVASAVVTAGLGKRVVPIALPDQFLDAGALPTLHERYGLSVD
RIVAKVLAELG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96230.1 transketolase Not tested T-PAI Protein 3e-69 73
unnamed AAT96118.1 transketolase Not tested T-PAI Protein 1e-77 71
unnamed AAT96057.1 transketolase Not tested T-PAI Protein 4e-88 68
unnamed AAT96101.1 transketolase Not tested T-PAI Protein 1e-88 67