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Name : secD (Maqu_1116) Accession : YP_958395.1 Strain : Marinobacter aquaeolei VT8 Genome accession: NC_008740 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 1267061 - 1268935 bp Length : 1875 bp Strand : + Note : part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of DNA sequence : ATGCTGAACAAGTATCCTCTCTGGAAAAACCTGGTCATCGTGTTCGCACTGGTGATTGGTTTTATCTATGCCTTACCGAA CTTTTTCCCTGACGATTACGCTATCCAGATCACCGGCGCCCGTGGCAGCACCGAAGTTGAGCAGCGAGTGCTTGATCGCG CCCTTGCCAAGCTTGAGCAGGAAGGCATCGAAGTCAAATCAAGCCTATTGGAAGAGCGGGACGCGCTGATCCGCCTCACC AGCTCCGATGAGCAGCTGCGGGCACGCCCCGCTGTTCAGGCGGCCCTTGGCAACGAATACCTGGTGGCCCTGAATATGGC GCCGTCAACGCCGGGCTGGCTGCGTAGCCTTGGAGCAGGCCCAATGAAACTGGGGCTGGATTTACGTGGTGGTGTTCACT TCCTGTTGGAGGTGGATATGGAAACGGCTTTGAATCAGCGTCTGGAAGCGTTGTCTGGTCAGATCAAGCGAGAGCTGAGG GAAGAGCGCATCCGCTACCGCGGTGGCGACATTGAGGATCAGGCCCGCATTGTACTGAGCTTCCGTGACGAAGCTGCACG TAGCGAGGCGTTTGAGCTGGTTCGCGATCAGTACAACGAGTTCCTGTTGGATGAGACAACAGAAGGTGAAGAGTTTCTGC TGACGCTGACACTGTCCGAAGCAGAAGTTCGGAACATCCAGGAATACGCTCTTGAACAGAACCTGACCACCATCCGCAAC CGGGTGAATGAACTGGGCGTGGCCGAGCCGCTGGTTCAGCGTCAGGGGGCAGACCGCATTATTGTAGAGCTGCCAGGTGT ACAGGATACCGCTCAGGCCAAGCGTGTACTTGGCGCGACGGCTAACCTGGAATTCCGGATGGAAGCTCGGCAGGATGCGC CGTCCGCCGAGACCGAACAGTTTCCTTTCCGGGATAATCCACAGCGTACCGCTCGTCTTGAGCGGGATGTGATTGCCACT GGTAACAACGTTGCCAATGCCCAGCAGGCGTTCGATGAGAATGGCCAGCCGCAGGTCAATATCACCATGGACTCCGTTGG TGGTGACCTGATGAATCGGGCGACTCGCAATAGCATCGGCCGCCGTATGGCAGTGTTGTTCATTGAATACCGCACCGAAA CCGAGACCCGGGAAGTTAACGGAGAAATCGTTGAAACTGAAAACCGGGTCGTGGAAAAAGGCATTATCAGCCTGGCGACA GTGCAGTCAGCGCTGGGGAGCAGCTTCCGGATTACTGGTCTGGATTCCATCCCCGAAGCGGCTGAGCTCGCACTGCTGCT GAGGGCCGGTGCTCTGGCTGCGCCCATGTACTTTGTGCAGGAGCGCACCATCGGGCCAAGCCTGGGGCAGAAGAATATCG ATGCCGGGATGATGTCGGTGATGCTCGGCTTCGGGCTGGTGTTGCTTTACATGCTGGTGTTCTACCGCGGCTTCGGATTG GTGGCCAATGTTGCGCTGACGCTTAACCTGATGTTGCTGGTTGCATGCATGTCAATCCTATCTGCCACGCTGACGTTGCC GGGTATCGCGGGTATCGTTCTTACGGTGGGTATGGCCGTTGATGCGAACGTTCTGATCTTTGAACGTATCAAGGAAGAGC TGAAGGCGGGTGTGCCGCCACAAAGCGCCATTAATGCCGGTTATGGTCGCGCCTTTGTGTCGATTTTCGATGCCAATATC ACAACCCTTCTGGTTGCCGTCATTCTGTTTGCCATGGGCTCCGGACCGGTGAAGGGCTTCGCAGTTACCCTGTGTATCGG TATTCTCACTTCCATGTTCTCGGGCCTGATGGTGAGCCGCGGCATAGTGAATCTGGTTTATGGCGGTCGCAGGGTCGAGA AATTGTCCATCGGGGGGAAGCTTGAAAATGCCTGA Protein sequence : MLNKYPLWKNLVIVFALVIGFIYALPNFFPDDYAIQITGARGSTEVEQRVLDRALAKLEQEGIEVKSSLLEERDALIRLT SSDEQLRARPAVQAALGNEYLVALNMAPSTPGWLRSLGAGPMKLGLDLRGGVHFLLEVDMETALNQRLEALSGQIKRELR EERIRYRGGDIEDQARIVLSFRDEAARSEAFELVRDQYNEFLLDETTEGEEFLLTLTLSEAEVRNIQEYALEQNLTTIRN RVNELGVAEPLVQRQGADRIIVELPGVQDTAQAKRVLGATANLEFRMEARQDAPSAETEQFPFRDNPQRTARLERDVIAT GNNVANAQQAFDENGQPQVNITMDSVGGDLMNRATRNSIGRRMAVLFIEYRTETETREVNGEIVETENRVVEKGIISLAT VQSALGSSFRITGLDSIPEAAELALLLRAGALAAPMYFVQERTIGPSLGQKNIDAGMMSVMLGFGLVLLYMLVFYRGFGL VANVALTLNLMLLVACMSILSATLTLPGIAGIVLTVGMAVDANVLIFERIKEELKAGVPPQSAINAGYGRAFVSIFDANI TTLLVAVILFAMGSGPVKGFAVTLCIGILTSMFSGLMVSRGIVNLVYGGRRVEKLSIGGKLENA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 1e-157 | 56 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 1e-157 | 56 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 1e-157 | 56 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 1e-157 | 56 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 5e-158 | 56 |
