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Name : secF (Sputw3181_1527) Accession : YP_962919.1 Strain : Shewanella sp. W3-18-1 Genome accession: NC_008750 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecF Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0341 EC number : - Position : 1733363 - 1734310 bp Length : 948 bp Strand : + Note : forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins f DNA sequence : ATGCTAGAAATTTTATCCTTAAAACGTACAGTAAACTTTCTCCGCCATGCGCTGCCGATTAGTATCTTATCCGCGGTTCT TGTGCTTGGCTCATTAGTGTCGCTTGCGATCAACGGTATTAACTGGGGTCTTGATTTCACTGGCGGTACTGTTGTTGAAA TGGAGTTTACTCAGCCTGTTGACTTGAATACGCTGCGTGTGCAACTGACGACACCTGATACCGAAGGCGCGATAGTACAA AATTTCGGTTCAAGCCGCGATGTATTAGTACGCTTATCTGTAAAAGAAGGCGTTAAGAGCGACGTGCAGGTTAAATCTGT TATGGACGCCGCACAGAAAGTTGATCCTCAAGTTCAGCAAAAGCGTGTTGAGTTTGTTGGCCCACAAGTGGGTAAAGAAC TGGCTGAACAAGGCGGATTGGCAGTATTAGTAGCGCTGATCTGTATTATGATCTACGTGTCTTTCCGCTTCGAATGGCGC TTAGCATTTGGTTCTGTTGCGGCACTCGCCCACGACGTTATCGTAACCTTAGGGGTATTTTCGTTATTCCAATTGGAATT CGATTTGACCGTATTGGCAGGTTTATTGACAGTGGTAGGTTACTCGCTTAACGATACTATCGTGGTATTTGACCGGATCC GTGAAAACTTCCTCAAGTTGCGTAAGAGTGAACCAGAAGATATCGTTAACATCTCTATCACTCAAACCATGAGTCGAACG ATTATTACCACGGGGACGACCTTAGTGGTTGTCGTGGCACTGTTTCTTAAAGGTGGCACTATGATCCATGGGTTTGCGAC TGCATTGCTAATGGGTATTTTTGTGGGTACCTATTCTTCTATTTATGTGGCGAGTTTCTTGGCCATTAAATTGGGGATTA GCCGCGAGCATATGATGCCCGTTGAGATCGAGAAAGAAGGCGCCGATCAGCCGTCTATGATGCCTTAG Protein sequence : MLEILSLKRTVNFLRHALPISILSAVLVLGSLVSLAINGINWGLDFTGGTVVEMEFTQPVDLNTLRVQLTTPDTEGAIVQ NFGSSRDVLVRLSVKEGVKSDVQVKSVMDAAQKVDPQVQQKRVEFVGPQVGKELAEQGGLAVLVALICIMIYVSFRFEWR LAFGSVAALAHDVIVTLGVFSLFQLEFDLTVLAGLLTVVGYSLNDTIVVFDRIRENFLKLRKSEPEDIVNISITQTMSRT IITTGTTLVVVVALFLKGGTMIHGFATALLMGIFVGTYSSIYVASFLAIKLGISREHMMPVEIEKEGADQPSMMP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secF | AAT96102.1 | SecF | Not tested | T-PAI | Protein | 1e-47 | 48 |
| secF | AAT96066.1 | SecF | Not tested | T-PAI | Protein | 4e-48 | 48 |
