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Name : rnhA (Sputw3181_2246) Accession : YP_963624.1 Strain : Shewanella sp. W3-18-1 Genome accession: NC_008750 Putative virulence/resistance : Unknown Product : ribonuclease H Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0328 EC number : - Position : 2593844 - 2594314 bp Length : 471 bp Strand : + Note : An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids DNA sequence : ATGACTGAACGAAAACTGATCCACATCTTCACTGACGGCTCTTGCTTAGGCAACCCCGGCCCCGGTGGCTATGGCATTGT AATGAATTATAAGGGTCATACAAAGGAGATGTCCGACGGTTTTGCACTTACCACCAATAATCGCATGGAATTGTTGGCAC CAATCATCGCCCTAGAAAGTCTTAAAGAACCTTGCAGAGTCGTTCTTACCAGTGATAGTCAATATATGCGCCAAGGCATA ATGACGTGGATCCACGGTTGGAAGAAAAAAGGGTGGATGACCTCAAACCGTACGCCTGTCAAAAATGTGGATCTTTGGAA ACGCTTAGATAAAGTATCGCAAATGCACACTATCGATTGGCAATGGGTAAAAGGCCACGCTGGCCATGCTGAAAATGAGC GTTGTGATATCCTAGCACGCTCCGCGGCTGAAGCGAATCCAACCCAAATCGATGAAGGTTATCAACCTTAA Protein sequence : MTERKLIHIFTDGSCLGNPGPGGYGIVMNYKGHTKEMSDGFALTTNNRMELLAPIIALESLKEPCRVVLTSDSQYMRQGI MTWIHGWKKKGWMTSNRTPVKNVDLWKRLDKVSQMHTIDWQWVKGHAGHAENERCDILARSAAEANPTQIDEGYQP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rnhA | AAO17224.1 | RnhA | Not tested | tcd island | Protein | 9e-49 | 64 |
