Gene Information

Name : Sputw3181_2450 (Sputw3181_2450)
Accession : YP_963828.1
Strain : Shewanella sp. W3-18-1
Genome accession: NC_008750
Putative virulence/resistance : Unknown
Product : cold-shock DNA-binding domain-containing protein
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 2828884 - 2829093 bp
Length : 210 bp
Strand : -
Note : PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: shm:Shewmr7_2477 cold-shock DNA-binding domain protein

DNA sequence :
ATGTCTCAAGTTACTGGTGTTGTTAAGTGGTTCAATTCTGACAAAGGTTTCGGATTCATTGAACAAGAATCAGGTCCAGA
TGTATTCGTACACTTCCGTGCGATTAACTCTGACGGTTTCAAAACTCTTGACGAAGGTCAAAAAGTGTCTTTCACTGTGA
CTCAAGGTCAAAAAGGTCCACAAGCTGAAAACGTAACCATCATTGGTTAA

Protein sequence :
MSQVTGVVKWFNSDKGFGFIEQESGPDVFVHFRAINSDGFKTLDEGQKVSFTVTQGQKGPQAENVTIIG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 3e-15 58