Gene Information

Name : Sputw3181_0429 (Sputw3181_0429)
Accession : YP_961834.1
Strain : Shewanella sp. W3-18-1
Genome accession: NC_008750
Putative virulence/resistance : Virulence
Product : microcompartment protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 468932 - 469234 bp
Length : 303 bp
Strand : -
Note : PFAM: microcompartments protein; KEGG: ssn:SSO_2058 putative propanediol utilization protein: polyhedral bodies

DNA sequence : 
ATGCAACAAGAAGCGTTAGGTATGGTCGAGACCAAAGGTCTGACTGCAGCAATAGAAGCTGCTGATGCGATGGTCAAATC
AGCCAATGTCGTGCTCATTGGTTACGAAAAAATTGGTTCTGGTCTGATAACAGTGCTCGTACGCGGAGATGTGGGTGCAG
TCAAAGCCGCCACCGATGCCGGTTGTGCCTCTGCTCGTCAGATCGGCGATGTCATCGCTACCCATGTCATTCCACGTCCG
CATTCTGATATTGAAAAACTCCTGCCAGCAGGCCTTAAACCATCTGAAGGAGTTAAACAATGA

Protein sequence : 
MQQEALGMVETKGLTAAIEAADAMVKSANVVLIGYEKIGSGLITVLVRGDVGAVKAATDAGCASARQIGDVIATHVIPRP
HSDIEKLLPAGLKPSEGVKQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 1e-21 66
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 5e-23 66
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 5e-22 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sputw3181_0429 YP_961834.1 microcompartment protein VFG1598 Protein 4e-22 66
Sputw3181_0429 YP_961834.1 microcompartment protein VFG1596 Protein 2e-23 66
Sputw3181_0429 YP_961834.1 microcompartment protein VFG1597 Protein 2e-22 64