Gene Information

Name : Sputw3181_0871 (Sputw3181_0871)
Accession : YP_962275.1
Strain : Shewanella sp. W3-18-1
Genome accession: NC_008750
Putative virulence/resistance : Unknown
Product : ErfK/YbiS/YcfS/YnhG family protein
Function : -
COG functional category : S : Function unknown
COG ID : COG1376
EC number : -
Position : 984424 - 985338 bp
Length : 915 bp
Strand : -
Note : PFAM: Peptidoglycan-binding LysM; ErfK/YbiS/YcfS/YnhG family protein; KEGG: son:SO3748 LysM domain protein

DNA sequence :
ATGAGTATGCTTCGCACCACAGCTTTATTATTGACTTTAGCGTTCCCAAGTCTCTCCGCTTTAGCAACGGAATACCCTTT
ACCGCCGCCTTCAAGTCGGTTAGTTGGCGAAAACCATTATTACACTGTGCCAGAGGGTAAACACACCCTAGAAGATATCG
CGGCTCAATTCCAGCTGGGTCTAAGTAACTTGATGGAAGCCAATCCTGGTGTCGATCCATTCTTACCCAAACCTGGCAGC
CAGTTATTAATTCCACACCAGTTAATTCTGCCAAACGCCCCGCGTGAAGGCATTGTGATCAACGTTGCGGAAATGCGTTT
GTACTACTACCCGAAGGGCAAAAAGACCGTTGAAGTCCTGCCTATTGGTATTGGACAAATTGGCAAAGATACGCCAGAAA
ACTGGGTGACTAGCGTTCAACGTAAGCGTGCCAATCCTACGTGGACACCAACACCACGTATCCGCAAAGAATACGCGGCA
AAAGGCGAAATTCTCCCCGCGGTATGGCCAGCAGGCCCTGATAACCCAATGGGCTTATATGCGCTCTATATTGGCAACTT
GTATGCTATCCATGGTACTAACGCCAGCTTTGGTATTGGTTTACGCGTCAGTCAAGGATGCGTGCGCTTACGCCACGAAG
ATATCGAGCATTTATTTAAAACAGTGCCTGTCGGCACTCGTGTACAATTTGTTAATCAACCGATTAAAGCGACAGAAGAG
CCTGATGGAAAACGCTATTTAGCGGTACATCAACCGCTATCGCGTACTATTGCAGAGTTTGAATCAAATGAACCTGTTGC
TATCTCCTTACCCAAGGATATCGTTAAGTTTATCGCGAAGGCGGATACCGATTCATCTGTGATTAAAAAACTGCTTGATG
AACGTACTGGCGTGCCCACCGTTATCAATCAGTAA

Protein sequence :
MSMLRTTALLLTLAFPSLSALATEYPLPPPSSRLVGENHYYTVPEGKHTLEDIAAQFQLGLSNLMEANPGVDPFLPKPGS
QLLIPHQLILPNAPREGIVINVAEMRLYYYPKGKKTVEVLPIGIGQIGKDTPENWVTSVQRKRANPTWTPTPRIRKEYAA
KGEILPAVWPAGPDNPMGLYALYIGNLYAIHGTNASFGIGLRVSQGCVRLRHEDIEHLFKTVPVGTRVQFVNQPIKATEE
PDGKRYLAVHQPLSRTIAEFESNEPVAISLPKDIVKFIAKADTDSSVIKKLLDERTGVPTVINQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
erfK YP_853091.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 2e-83 62