Gene Information

Name : Sputw3181_0956 (Sputw3181_0956)
Accession : YP_962360.1
Strain : Shewanella sp. W3-18-1
Genome accession: NC_008750
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1088734 - 1089474 bp
Length : 741 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: shm:Shewmr7_3159 ABC transporter related

DNA sequence : 
ATGTTATCAATGAAGAATGTGAGCAAGGTTTTTAAAACGGATCTCGTTGAAACCCACGCCCTGCGCGATTTTAACCTCGA
GGTGAACGAAGGCGAATTTGTCGCGGTAACGGGTCCTTCAGGCTCAGGTAAAACCACCTTTTTAAATATCGCAGGTTTAC
TCGAAGGCTTTACCCATGGTGATTATTTTCTCGATGGGATTAACGTGTCTAACTTGAGCGATAACAAGAGCGCTACTGTC
CGTAATGAGAAAATTGGCTTTATTTTCCAAGGTTTTAATTTAATTCCCGATCTTAACTTAGCTGAGAATATTGAAGTGCC
GCTGCGCTACCGTGGCTTTAATGCCAAGGAGCGTCAACGCCGCGTACAAGAGGCATTAGAGCAAGTGGGCCTAGCTTCAC
GCCTCAAGCATTTACCTACGCAGTTGTCGGGCGGACAGCAACAAAGGGTGGCGATAGCTCGGGCATTGGCGGGTAAGCCA
CGCTTCCTGCTCGCCGACGAACCCACAGGAAACCTCGACAGCCTAATGGCCCGTCAAGTGATGGAATTACTTGAAAATAT
CAACCAAGCGGGCACGACCATCATTATGGTGACGCACGATCCTGAACTCGCTCGTCGCGCCCAACGCAATATTCAAATTG
TCGATGGCCAAGTGTGTGATTTTACGATGTATCAGCCCCGTGGCAGCGCACAAATTGCGACGACAGATCCACTAGACAAA
CTTGTCGCTAACGCAGACTAA

Protein sequence : 
MLSMKNVSKVFKTDLVETHALRDFNLEVNEGEFVAVTGPSGSGKTTFLNIAGLLEGFTHGDYFLDGINVSNLSDNKSATV
RNEKIGFIFQGFNLIPDLNLAENIEVPLRYRGFNAKERQRRVQEALEQVGLASRLKHLPTQLSGGQQQRVAIARALAGKP
RFLLADEPTGNLDSLMARQVMELLENINQAGTTIIMVTHDPELARRAQRNIQIVDGQVCDFTMYQPRGSAQIATTDPLDK
LVANAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-33 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 8e-32 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-33 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sputw3181_0956 YP_962360.1 ABC transporter-like protein NC_008702.1.4606598. Protein 3e-45 52
Sputw3181_0956 YP_962360.1 ABC transporter-like protein NC_012469.1.7686878. Protein 9e-52 50
Sputw3181_0956 YP_962360.1 ABC transporter-like protein CP001581.1.gene798.p Protein 6e-38 45
Sputw3181_0956 YP_962360.1 ABC transporter-like protein CP001581.1.gene598.p Protein 1e-30 41