Gene Information

Name : rnhA (Dvul_2274)
Accession : YP_967717.1
Strain : Desulfovibrio vulgaris DP4
Genome accession: NC_008751
Putative virulence/resistance : Unknown
Product : ribonuclease H
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0328
EC number : -
Position : 2650559 - 2651029 bp
Length : 471 bp
Strand : -
Note : An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids

DNA sequence :
ATGTCGCAGTTCGACGTAACGGTGTTCACGGACGGTTCGTGCCTTGGCAATCCCGGCCCCGGGGGCTGGGCGGCCATCAT
GCGCTGCAACGGGTGTGAGAAGGAGCTTTCGGGCGGCTTCGCCCTGACGACGAACAACCGCATGGAGATTCTCGCCGTGC
TGGAGGCCCTTGAGGCCCTTCGCGACCCCTGCAAGGTCACGCTATTCACGGACTCGCAGTATGTACGCAACGCCGTCGAG
AAGAAGTGGCTTGCGGGGTGGCAGCGCAACGGATGGAAGACCGCCGACAAGAAACCCGTGAAGAACCGCGACCTGTGGGA
ACGTCTGGTGCCGTTGCTGGCGAAGCATTCGGTATCCTTCCGGTGGGTGCGCGGACATAGCGGGCATCCCGAGAACGAGC
GTTGCGACGTTCTGGCACGGGCGCAGGCTTCGCGCCGGGGATTGCCGGAAGACCCCGGTTTCACGGCCTGA

Protein sequence :
MSQFDVTVFTDGSCLGNPGPGGWAAIMRCNGCEKELSGGFALTTNNRMEILAVLEALEALRDPCKVTLFTDSQYVRNAVE
KKWLAGWQRNGWKTADKKPVKNRDLWERLVPLLAKHSVSFRWVRGHSGHPENERCDVLARAQASRRGLPEDPGFTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rnhA AAO17224.1 RnhA Not tested tcd island Protein 4e-31 53