Gene Information

Name : glcF (Aave_0244)
Accession : YP_968625.1
Strain : Acidovorax citrulli AAC00-1
Genome accession: NC_008752
Putative virulence/resistance : Unknown
Product : glycolate oxidase iron-sulfur subunit
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0247
EC number : -
Position : 274115 - 275374 bp
Length : 1260 bp
Strand : +
Note : PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF224, cysteine-rich region domain protein; KEGG: pol:Bpro_0188 protein of unknown function DUF224, cysteine-rich region

DNA sequence :
ATGCAAACCCGACTCGCCCCCGAATTCCAGGACACGCCCGAAGGCCGCGAGGCCGAGGGCATCCTGCGCAAGTGCGTGCA
TTGCGGCTTCTGTACCGCCACGTGCCCGACCTACCAGTTGCTCGGCGACGAGCTGGACGGGCCGCGCGGGCGCATCTACC
TCATCAAGCAGGTGCTGGAAGGGGAGACGCCCACGCGCAAGACGCAGCTGCACCTGGACCGCTGCCTGACCTGCCGCAAC
TGCGAGACGACCTGCCCCAGCGGCGTGCAGTACGGGCGCCTGGTGGATATCGGCCGGCGCATCGTCGAGGACAAGGTGCC
GCGGCCGCTGCCCGAGCGCGCGCGCCGCTGGGCGTTGAAGGAGGGGCTGCCCTCGCCGCTGTTCAAGCCGGCGCTGAAGG
CCGGCCAGGCCGTGCGCGGGCTGCTGCCCGCCACGCTGCGCGCCAAGGTGCCGCGCCCCCAGGAGGCGGGCGCCTGGCCG
GTGCGCGAGCACGCGCGCAAGGTGCTCATGCTCGCGGGCTGCGTGCAGCCGGCGATGCTGCCCAACGTGAACCGCGCCAC
CGCGCGCGTGCTGGATGCCGCGGGCATCCAGACCGTGATCGCCGCCGGCGAGGGCTGTTGCGGCGCGGTGAAGTTCCACC
TCAACGACCAGGACGGCGGCCTCGCGCAGATGCGCACCAATATCGATGCCTGGTGGCCCCACGTGGAGGCGGGGGGCGTG
GAAGCGATCGTGCTCAATGCCTCGGGCTGCGGCGCCACGGTGAAGGAGTACGGCCACCTGCTGCGGCATGATCCGGCCTA
TGCCGCGCGGGCGGAGCGCGTCAGCGCGCTGGCCAGGGATCTTTCCGAACTGCTGCCGGACATGCTGCCCGCGCTCGCCG
AGCGCCTGGAAGGGCGCATCGATGCTCCGAAGGCGCTGCTGGCCTACCACCCGCCCTGCACGCTGCAGCACGGGCAGAAG
CTGCGCGGCGGCGTGGAGACCTATTTGGCTCGCCTGGGCTTTCGCCTGCGCGTGGCGCGCACCGAATCGCATCTGTGCTG
CGGATCGGCCGGCACCTATTCGCTGCTGCAACCGGAGATCGCCGGCCAGTTGCGCGACCGCAAGCTCGGCGCGCTGGACG
AGGCCTGCGCGGAGGAGCCGCCCGCGGCCATCCTCTCGGCCAATATCGGCTGCATCACGCACCTGCAGAGCGGCACGGCC
ACGCCGGTGCGGCACTGGATCGAGGTGCTGGACGAGGCGCTGCGGCCCGGTGCGGTGTGA

Protein sequence :
MQTRLAPEFQDTPEGREAEGILRKCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEGETPTRKTQLHLDRCLTCRN
CETTCPSGVQYGRLVDIGRRIVEDKVPRPLPERARRWALKEGLPSPLFKPALKAGQAVRGLLPATLRAKVPRPQEAGAWP
VREHARKVLMLAGCVQPAMLPNVNRATARVLDAAGIQTVIAAGEGCCGAVKFHLNDQDGGLAQMRTNIDAWWPHVEAGGV
EAIVLNASGCGATVKEYGHLLRHDPAYAARAERVSALARDLSELLPDMLPALAERLEGRIDAPKALLAYHPPCTLQHGQK
LRGGVETYLARLGFRLRVARTESHLCCGSAGTYSLLQPEIAGQLRDRKLGALDEACAEEPPAAILSANIGCITHLQSGTA
TPVRHWIEVLDEALRPGAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcF CAE85243.1 GlcF protein Not tested PAI V 536 Protein 2e-109 59