Gene Information

Name : Aave_3486 (Aave_3486)
Accession : YP_971815.1
Strain : Acidovorax citrulli AAC00-1
Genome accession: NC_008752
Putative virulence/resistance : Virulence
Product : Rhs element Vgr protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3501
EC number : -
Position : 3850004 - 3852328 bp
Length : 2325 bp
Strand : -
Note : PFAM: Rhs element Vgr protein; Gp5 domain protein; KEGG: bps:BPSS2093 hypothetical protein

DNA sequence :
ATGACACGCCGCGTCACCATCCGGACGCCCCTGGGAGAGCAGCTGCAATTCAGGCAGCTGCGGGGTAGCGAGGAGCTGAG
CCAGCTTTTCTCCTTCGACATCGACCTGCTCTCGGAAGGCCGCGACATCGATCCCAAGGCCTTGCTCGGCAAGACAGCGA
CGGTGGAGATCGAGACCGAAGGCGGCGGCAAGCGGTACCTGGACGGCCTGGTCACGCGCTTCGGCATGCAGGGGCAGGAC
CATCGGCTGTACTCCTACCACCTGCGCCTGCAGCCCTGGCTCTGGGTGGCCACGCGGCGGCAGGACTTCCGCATCTTCCA
GTTCAAGACCGTCCCGCAGATCGTGCAGGAGGTGCTGGGCCGCTACGGTTATCCGCTGCAGTTGAAGCTCACGCGCGCGT
ACCGCGCCTGGGACTACTGCGTGCAGTACGGCGAGAGCGACTTCGACTTCGTCTCCCGCCTCTTGGAGCATGAGGGCGCG
TACTACTACTTCCAGCACGCGAGCGGCCAGCACACCCTGGTGATCGCCGATGACATCGTGGCCGGGCACGAACCGCTGCC
GGGCGCGGCGGTGATCCCGTTCTACCCGCCTGAGAAGTCGGCCGTGGCCGACCGCGAGAACATCCATGCCTGGACGCTGG
GCGAGGAGATCAAGCCGGGCCGGTACTACAACGACGACTACGACTTCAAGAAGCCGAGGTCGGACCTGTCCAACATGCGC
CAGCAGCCTCCGGGCCATGCGCACGATGCCTACGAGATCTACGAATGGCCGGGCGGCTACGTGCAGCACGGCGACGGCGA
GCAGTACGCCCGCGTGCGGCTGCAGGAAGGCCTGACCGGGCACAGCACCGTCAGGGGCGAATCGCGCCACAGGAGCCTGG
CGCCGGGCTACACCTTCACGCTGGAGAACTACCCGCGCGGCGACCAGAACCGGCAGTACCTCATCACCGGCGTCACCTAC
CACCTGCACGAGAACCCGCGGACATCTTCAGCCAACAGCGCCAGGCCCGGCGAGACGCTCAAGCACAACGAAGAGCACGG
CTCCTTCCAGAAGTTCAGCCTCACGGCCCAGCCCACGAGCCTGCCCTATACCCCCGCCAGAAAGACCCCGAAGCCGCGCA
CCACCGGCCCGCAGACCGCCGTCGTGGTCGGCCCGGCCGGGGAAGAAATCTGGACCGACGAATACGGCCGCATCAAGGTG
CAGTTCCACTGGGACCGGCTGGGGGCGATGGACGAGAACTCCAGTTGCTGGATGCGGGTGGCCACGAGCTGGGCGGGCTC
GGGCTTCGGTGCGATCTCGATCCCACGCATTGGCCAAGAAGTCATAGTGGACTTCCTGAACGGCGACCCCGACTATCCCA
TCGTCACCGGCAGCGTCTATAACGCCGCGAACATGCCGCCCTGGGCCTTGCCGGGCAACGCCACGCAGTCGGGCATCAAG
ACGAAGTCCAGCAAGGGCGGGGCGTTCGGCGACGGGATGAAGAACGGCGCGGGCGATGCCAACGCGATCTGCTTCGAGGA
CAAGAAGGGCGCGGAGCAGGTGTGGCTGCATGCGCAGAAGGACCAGCTCACCGAAGTCGAGAACGATGAGGATAAGTGGG
TGGGAAATGACCGGCGAAAAACGATCGACCGGGACGAGACCACCATCGTGCATCGCGACCGGACAGAAACTGTGGACCGC
GACGAGAAGATCACGGTGCACAACAACCGCACGGAGCGGGTGGACCATGACGAGACGATCTCGATCGGCGACAACCGGAA
CGAAGATGTCGGCATCGACGAGACGGTTTCCATCGGCAAGAACCGCACGAAGACCATCGGCCGCAACGAGAAGGACAGGA
TCGGCAACAACTGGTCGATCAAGGTCGGCAGCTTCAAGACCGAAACCATCGGCCTGGCCTACATGCAGAACGTGGGCCTG
GCCAAGATGGTGAACATCGGCGCGGCCTACAACGTGAACGTGGGCGCGGCGATGGTGGTGAACGTGGGGCTCAACCAGTC
CACCAACGTGCTCATGAACCGGTCCGTCACCGTGGGACAGAGCCAGACCACGAAGGTCGGCGCGGATCGCACGGACGAGA
CGTCCGACAACTACACGGAGAACGTGGGCAAGAACTCGGCCACCACCGTGGGCGAAGTGCGCACCCTGAGCGTGGGCAAG
GAAATGTCCGTCAAGGTCGGCGACGCGATCGAGATCCAGTGCGGCAAGGCCGTGCTGCGCATGACCAGCGACGGCACGGT
GCAGATCAACGGGCAGACGATTTCCATCGCGGGCAGCTCCAAGGTGACGGTCTCGTCGCCGGACAGCCACGTCAATCCTG
CGTGA

Protein sequence :
MTRRVTIRTPLGEQLQFRQLRGSEELSQLFSFDIDLLSEGRDIDPKALLGKTATVEIETEGGGKRYLDGLVTRFGMQGQD
HRLYSYHLRLQPWLWVATRRQDFRIFQFKTVPQIVQEVLGRYGYPLQLKLTRAYRAWDYCVQYGESDFDFVSRLLEHEGA
YYYFQHASGQHTLVIADDIVAGHEPLPGAAVIPFYPPEKSAVADRENIHAWTLGEEIKPGRYYNDDYDFKKPRSDLSNMR
QQPPGHAHDAYEIYEWPGGYVQHGDGEQYARVRLQEGLTGHSTVRGESRHRSLAPGYTFTLENYPRGDQNRQYLITGVTY
HLHENPRTSSANSARPGETLKHNEEHGSFQKFSLTAQPTSLPYTPARKTPKPRTTGPQTAVVVGPAGEEIWTDEYGRIKV
QFHWDRLGAMDENSSCWMRVATSWAGSGFGAISIPRIGQEVIVDFLNGDPDYPIVTGSVYNAANMPPWALPGNATQSGIK
TKSSKGGAFGDGMKNGAGDANAICFEDKKGAEQVWLHAQKDQLTEVENDEDKWVGNDRRKTIDRDETTIVHRDRTETVDR
DEKITVHNNRTERVDHDETISIGDNRNEDVGIDETVSIGKNRTKTIGRNEKDRIGNNWSIKVGSFKTETIGLAYMQNVGL
AKMVNIGAAYNVNVGAAMVVNVGLNQSTNVLMNRSVTVGQSQTTKVGADRTDETSDNYTENVGKNSATTVGEVRTLSVGK
EMSVKVGDAIEIQCGKAVLRMTSDGTVQINGQTISIAGSSKVTVSSPDSHVNPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0319 NP_454896.1 Rhs-family protein Not tested SPI-6 Protein 1e-102 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Aave_3486 YP_971815.1 Rhs element Vgr protein VFG2077 Protein 2e-110 42