Gene Information

Name : Aave_4009 (Aave_4009)
Accession : YP_972324.1
Strain : Acidovorax citrulli AAC00-1
Genome accession: NC_008752
Putative virulence/resistance : Virulence
Product : Rhs element Vgr protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3501
EC number : -
Position : 4454162 - 4456432 bp
Length : 2271 bp
Strand : -
Note : PFAM: Rhs element Vgr protein; Gp5 domain protein; KEGG: bps:BPSS2093 hypothetical protein

DNA sequence :
ATGACACGCCGCGTCACCATCCGGACGCCCCTGGGAGAGCAGCTGCAATTCCGGCAGTTGCGGGGCAGCGAGGAGCTGAG
CCAGCTTTTCTCCTTCGACATCGACCTGCTCTCGGAAGGCCGCGACATCGATCCCAAGGCCTTGCTCGGCAAGACGGCGA
CGGTGGAGATCGAGACCGAAGGCGGTGGCAAGCGTTACCTGGACGGCCTGGTCACGCGCTTCGGCATGCAGGGGCAGGAC
CATCGGCTGTACTCCTACCACCTGCGCCTGCAGCCCTGGCTGTGGGTGGCCACGCGGCGGCAGGACTTCCGCATCTTCCA
GTTCAAGACCGTCCCGCAGATCGTCCAGGAAGTGCTGGGTCGCTACGGTTACCCCATGCAGCTCAAGCTCACGCGCGCCT
ACCGTGCCTGGGATTACTGCGTGCAGTACGGCGAGAGCGACTTCGACTTCGTTTCCCGCCTGCTCGAGCATGAAGGGGCG
TACTACTACTTCCAGCACGCGAGCGGCCAGCACACCCTGGTGATCGCCGACGACATCGTGGCCGGCCACGAGCCTTTGCC
GGGCGCGGCCGTGATCCCGTTCTACCCACCCGAGAAGTCGGCCGTCGCGGACCGCGAGAACATCCACGCCTGGACCCTGG
GCGAGGAGATCAAGTCCGGCCGCTACTACAACGACGACTACGACTTCCGCAAACCGAGGTCGGACCTCTCCAACATGCGC
CAGCAGCCCCCGGGGCATGCGCACGATGCCTACGAGATCTACGAATGGCCGGGCGGCTACGTGCAGCATGGCGATGGTGA
GCAGTACGCCCGGGTACGCCTGCAGGAAGGCCTGACGGGCCACAGCGTCGTCAAAGGCGAATCGCGCCACCGCAGCCTCG
CGACGGGCTACACCTTCACGCTGGAGAACTACCCGCGGGGCGACCAGAACCGGCAGTACCTCATCACCGGCGTCACCTAC
CACCTGCACGAGAACCCGAGAAGCTCATCCTTCAACAGCGCCAAGCCGGGTGAATCGCTCAAGCACAACGAAGAGCAGGG
GTTGTTCCAGAAGTTCAGCCTCACGGCCCAGCCCACGAGCCTGCCCTACACCCCGGCCAGAAAGACCCCCAAACCCCGCA
CGACCGGCCCGCAGACCGCCGTCGTGGTCGGCCCGGCGGGCGAGGAAATCTGGACGGACGAGTACGGCCGCATCAAGGTG
CAGTTCCACTGGGACCGGCTGGGGGCGATGGACGAGAACTCCAGTTGCTGGATGCGGGTGGCCACGAGCTGGGCGGGCTC
GGGGTTCGGAGCGATCTCGATCCCGCGCATCGGGCACGAAGTGGTGGTCGACTTCCTCAACGGCGATCCTGACTATCCGC
TGGTCGTGGGCTGCGTGTACAACGCGGCGAACATGCCGCCCTGGGCCTTGCCGGGCAATGCCACGCAGTCGGGCATCAAG
ACCAAGTCCAGCAAGGGCGGGGCCTTCGGCGACGGGATGAAGAACGGCGCGGGCGATGCCAACGCGATCCGCTTCGAGGA
CAAGAAGGGCGCAGAGCAATTATGGCTGCATGCGCAGAAGGACCAGCTCATCGAGGTGGAAAACGACGAGGACCACTGGG
TGGGCCAGGACCGGCGCAAGACCATCGACCGGGACGAGACGAACGTGATCCACCGGGACCGGACGGAAACGGTGGACCGC
AACGAGAAAATCACGGTGCATGGCTGGCGCACCGAGGAAGTGGATGGCGACGAGACCATCACCATCCACTCCAACCGCAA
GGAGCGTGTGGACCACGACGAGACGATCTCGATCGGCGACAACCGCGACGAGACCGTGGGCGCCAACGAAGACATCCGCA
TCGGCAGCAATCGCAGCAAGACCGTCGGGCAGAGCGAGAAGGACCGCATCGGCACCAGCTGGAACATCCGGGTGGGCACG
ATGAAGACCGAGACCATCGGGATGACGGCCATGCAGAACGTGGGCCTGGCCAAGATGGTGAACGTGGGGCTGGCCTACAG
CGTCAACATCGGCGGCGTGCGCAGCGACATCGTGGGCGCCAACTGGACCCGCACGGTCATCGGCAGCGACTCGGTGAGCG
TGGGCTCGGACCGCAAGGCGAGCGTGAGCGGCACGGACAGCCTGGAGGTGTCTGGCGCGCTCACGGTGAAGGCCAGGACC
ATCACGCTGGAGGCGGGCGACGAGATCACGCTGCGCTGCGGATCGAGCACGGTGCGGCTGACGCCCGCGCTCATCGAAGT
GCTGTCCTCGCTGGACAAGCTCAACTGCTAG

Protein sequence :
MTRRVTIRTPLGEQLQFRQLRGSEELSQLFSFDIDLLSEGRDIDPKALLGKTATVEIETEGGGKRYLDGLVTRFGMQGQD
HRLYSYHLRLQPWLWVATRRQDFRIFQFKTVPQIVQEVLGRYGYPMQLKLTRAYRAWDYCVQYGESDFDFVSRLLEHEGA
YYYFQHASGQHTLVIADDIVAGHEPLPGAAVIPFYPPEKSAVADRENIHAWTLGEEIKSGRYYNDDYDFRKPRSDLSNMR
QQPPGHAHDAYEIYEWPGGYVQHGDGEQYARVRLQEGLTGHSVVKGESRHRSLATGYTFTLENYPRGDQNRQYLITGVTY
HLHENPRSSSFNSAKPGESLKHNEEQGLFQKFSLTAQPTSLPYTPARKTPKPRTTGPQTAVVVGPAGEEIWTDEYGRIKV
QFHWDRLGAMDENSSCWMRVATSWAGSGFGAISIPRIGHEVVVDFLNGDPDYPLVVGCVYNAANMPPWALPGNATQSGIK
TKSSKGGAFGDGMKNGAGDANAIRFEDKKGAEQLWLHAQKDQLIEVENDEDHWVGQDRRKTIDRDETNVIHRDRTETVDR
NEKITVHGWRTEEVDGDETITIHSNRKERVDHDETISIGDNRDETVGANEDIRIGSNRSKTVGQSEKDRIGTSWNIRVGT
MKTETIGMTAMQNVGLAKMVNVGLAYSVNIGGVRSDIVGANWTRTVIGSDSVSVGSDRKASVSGTDSLEVSGALTVKART
ITLEAGDEITLRCGSSTVRLTPALIEVLSSLDKLNC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0319 NP_454896.1 Rhs-family protein Not tested SPI-6 Protein 6e-102 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Aave_4009 YP_972324.1 Rhs element Vgr protein VFG2077 Protein 3e-108 42