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Name : NMC1342 (NMC1342) Accession : YP_975348.1 Strain : Neisseria meningitidis FAM18 Genome accession: NC_008767 Putative virulence/resistance : Virulence Product : cytolysin secretion ABC transporter Function : - COG functional category : V : Defense mechanisms COG ID : COG2274 EC number : - Position : 1327063 - 1329291 bp Length : 2229 bp Strand : - Note : - DNA sequence : ATGCGTTCTGCTGTTTTATTTATATATTTCTTTCTACTTAATATATTCCTTTTCCAGCCAGCCGTTATCCACATCCAATC TAACTATATTTTATTTATGTCTATCGTATCCGCACCGCTCCCCGCCCTTTCCGCCCTCATCATCCTCGCCCATTACCACG GCATTGCCGCCAATCCTGCCGATATACAGCATGAATTTTGTACTTCCGCACAGAGCGATTTAAATGAAACGCAATGGCTG TTAGCCGCCAAATCTTTGGGATTGAAGGCAAAGGTAGTCCGCCAGCCTATTAAACGTTTGGCTATGGCGACTTTACCCGC ATTGGTATGGTGTGATGACGGCAACCATTTCATTTTGGCCAAAACAGACGGTGAGGGTGAGCATGCCCAATTTTTGATAC AGGATTTGGTTACGAATAAGTCTGCGGTATTGTCTTTTGCCGAATTTTCTAACAGATATTCGGGCAAACTGATATTGGTT GCTTCCCGCGCTTCGGTATTGGGCAGTTTGGCAAAGTTTGACTTTACCTGGTTTATTCCGGCGGTAATCAAATACCGCCG GTTGTTTTTTGAAGTATTGGTGGTGTCGGTGGTGTTGCAGCTGTTTGCGCTGATTACGCCTCTGTTTTTCCAAGTGGTGA TGGACAAGGTGCTGGTACATCGGGGATTCTCTACTTTGGATGTGGTGTCGGTGGCTTTGTTGGTGGTGTCGCTGTTTGAG ATTGTGTTGGGCGGTTTGCGGACGTATCTGTTTGCACATACGACTTCACGTATTGATGTGGAATTGGGCGCGCGTTTGTT CCGGCATCTGCTTTCCCTGCCTTTATCCTATTTCGAGCACAGACGAGTGGGTGATACGGTGGCTCGGGTGCGGGAATTGG AGCAGATTCGCAATTTCTTGACCGGTCAGGCGCTGACTTCGGTGTTGGATTTGGCGTTTTCGTTTATCTTTCTGGCGGTG ATGTGGTATTACAGCTCCACTCTGACTTGGGTGGTATTGGCTTCGTTGCCTGCCTATGCGTTTTGGTCGGCATTTATCAG TCCGATACTGCGGACGCGTCTGAACGATAAGTTCGCGCGCAATGCAGACAACCAGTCGTTTTTAGTAGAAAGCATCACTG CGGTGGGTACGGTAAAGGCGATGGCGGTGGAGCCGCAGATGACGCAGCGTTGGGACAATCAGTTGGCGGCTTATGTGGCT TCGGGATTTCGGGTAACGAAGTTGGCGGTGGTCGGCCAGCAGGGGGTGCAGCTGATTCAGAAGCTGGTGACGGTGGCGAC GTTGTGGATTGGCGCACGGCTGGTAATTGAGGGCAAGCTGACGGTGGGGCAGCTGATTGCGTTTAATATGCTCTCGGGAC AGGTGGCGGCGCCTGTTATCCGTTTGGCGCAGTTGTGGCAGGATTTCCAGCAGGTGGGGATTTCGGTGGCGCGTTTGGGG GATATTCTGAATGCGCCGACCGAGAATGCGTCTTCGCATTTGGCTTTGCCCGATATCCGGGGGGAGATTACGTTCGAACA TGTCGATTTCCGCTATAAGGCGGACGGCAGGCTGATTTTGCAGGATTTGAACCTGCGGATTCGGGCGGGGGAAGTGCTGG GGATTGTGGGACGTTCGGGGTCGGGCAAATCCACACTCACCAAATTGGTGCAGCGTCTGTATGTACCGGAGCAGGGACGG GTGTTGGTGGACGGCAACGATTTGGCTTTGGCCGCTCCTGCCTGGCTGCGGCGGCAGGTCGGCGTGGTCTTGCAGGAGAA TGTGCTGCTCAACCGCAGCATACGCGACAATATCGCGCTGACGGATACGGGTATGCCGCTGGAACGCATTATCGAAGCAG CCAAACTGGCGGGCGCACACGAGTTTATTATGGAGCTGCCGGAAGGCTACGGCACCGTGGTGGGCGAACAAGGGGCCGGC TTGTCGGGCGGACAGCGGCAGCGTATTGCGATTGCCCGCGCGTTAATCACCAATCCGCGCATTCTGATTTTTGATGAAGC CACCAGCGCGCTGGATTATGAAAGTGAACGAGCGATTATGCAGAACATGCAGGCCATTTGCGCCAACCGGACGGTGCTGA TTATCGCCCACCGTCTGTCCACTGTTAAAACGGCACACCGGATCATTGCCATGGATAAAGGCAGGATTGTGGAAGCGGGA ACACAGCAGGAATTGCTGGCGAAGCCGAACGGATATTACCGCTATCTGTATGATTTACAGAACGGGTAG Protein sequence : MRSAVLFIYFFLLNIFLFQPAVIHIQSNYILFMSIVSAPLPALSALIILAHYHGIAANPADIQHEFCTSAQSDLNETQWL LAAKSLGLKAKVVRQPIKRLAMATLPALVWCDDGNHFILAKTDGEGEHAQFLIQDLVTNKSAVLSFAEFSNRYSGKLILV ASRASVLGSLAKFDFTWFIPAVIKYRRLFFEVLVVSVVLQLFALITPLFFQVVMDKVLVHRGFSTLDVVSVALLVVSLFE IVLGGLRTYLFAHTTSRIDVELGARLFRHLLSLPLSYFEHRRVGDTVARVRELEQIRNFLTGQALTSVLDLAFSFIFLAV MWYYSSTLTWVVLASLPAYAFWSAFISPILRTRLNDKFARNADNQSFLVESITAVGTVKAMAVEPQMTQRWDNQLAAYVA SGFRVTKLAVVGQQGVQLIQKLVTVATLWIGARLVIEGKLTVGQLIAFNMLSGQVAAPVIRLAQLWQDFQQVGISVARLG DILNAPTENASSHLALPDIRGEITFEHVDFRYKADGRLILQDLNLRIRAGEVLGIVGRSGSGKSTLTKLVQRLYVPEQGR VLVDGNDLALAAPAWLRRQVGVVLQENVLLNRSIRDNIALTDTGMPLERIIEAAKLAGAHEFIMELPEGYGTVVGEQGAG LSGGQRQRIAIARALITNPRILIFDEATSALDYESERAIMQNMQAICANRTVLIIAHRLSTVKTAHRIIAMDKGRIVEAG TQQELLAKPNGYYRYLYDLQNG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hlyB | NP_755448.1 | hemolysin B | Virulence | PAI I CFT073 | Protein | 0.0 | 71 |
| hlyB | CAD33760.1 | hemolysin B | Virulence | PAI I 536 | Protein | 0.0 | 71 |
| hlyB | CAD42038.1 | HlyB protein | Virulence | PAI II 536 | Protein | 0.0 | 71 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| NMC1342 | YP_975348.1 | cytolysin secretion ABC transporter | VFG0907 | Protein | 0.0 | 71 |
| NMC1342 | YP_975348.1 | cytolysin secretion ABC transporter | VFG1557 | Protein | 0.0 | 71 |
| NMC1342 | YP_975348.1 | cytolysin secretion ABC transporter | VFG1501 | Protein | 0.0 | 71 |
| NMC1342 | YP_975348.1 | cytolysin secretion ABC transporter | VFG0841 | Protein | 0.0 | 66 |
| NMC1342 | YP_975348.1 | cytolysin secretion ABC transporter | VFG1269 | Protein | 1e-174 | 56 |
