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Name : glcF (Pnap_0125) Accession : YP_980371.1 Strain : Polaromonas naphthalenivorans CJ2 Genome accession: NC_008781 Putative virulence/resistance : Unknown Product : glycolate oxidase iron-sulfur subunit Function : - COG functional category : C : Energy production and conversion COG ID : COG0247 EC number : - Position : 137627 - 138874 bp Length : 1248 bp Strand : + Note : PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF224, cysteine-rich region domain protein; KEGG: pol:Bpro_0188 protein of unknown function DUF224, cysteine-rich region DNA sequence : ATGCAAACCCAACTCGCCCCCGAATTCCAGAACACGCCCGATGGCCGCCAGGCCGAAGCCATTTTGCGCAAATGCGTGCA CTGCGGTTTCTGCACCGCCACCTGCCCGACCTACCAGCTGCTCGGCGACGAGCTGGACGGCCCGCGCGGCCGCATCTACC TGATCAAGCAGGTGCTCGAAGGCGAAACGCCGACGCGCAAGACCCAGTTGCACCTGGACCGCTGCCTGACCTGCCGCAAC TGCGAATCCACCTGCCCCAGCGGCGTGCAGTACGGCCACCTGGTCGATATCGGCCGCAAGCTGGTCGATGAACGCGTGCC GCGCCCGGTGGGCGAGCGCGCCGTGCGCTGGGCGCTCAAGGAAGGCCTGCCGTCGCCGCTGTTCGCCCCCGCCATGAAGA TCGGCCAGGCGGTGCGCGGCCTGCTGCCCGAGTCGCTTAAGGCCAAGGTGCCGCCCAAACAGCCGGCCGGCCAGTGGCCC ACGCGCAGCCATGCGCGCAAGATGCTGATGCTGGAGGGCTGCGTGCAGCCGGCCATGATGCCCAACATCAATTCGGCCAC CGCTCGCGTGCTGGACGCCGCCGGCATCGAGGTCGTGACGGCGGCCAAGGCCGGCTGCTGCGGCGCGGTGAAGTTCCACC TGAACGACCAGGACGGCGGCAAGCTGGAAATGCGCCGCAACATCGACGCCTGGTGGCCGTATGTGGAGCAGGGCGTTGAA GCGCTGGTGATGAACGCCTCGGGCTGCGGCGTCACCGTCAAGGAATACGGCTACATCCTGAAAGACGATGCGGCCTATGC CGAAAAAGCCGCCCGCATCAGCGCGCTGACCCGCGACCTGAGCGAGTTGCTGCCGGTTATCGCCGAATCGCTGCAAGCCA GCCGGCCCGACCTGGCCGGAAAGATTGCCGCCGGCGCCCCCAGGCTGGCGTTTCACCCGCCGTGCACGCTGCAGCACGGC CAGCAGCTGCGCGGCGGCGTCGAGCAGCATCTGGGCGCATTGGGTTTCGACATCAAGGTCTCCGGCAATGAGGCGCACCT GTGCTGCGGCTCGGCGGGCACCTACTCGGTGCTGAACCCCGAGATCGCCTACCAGTTGCGCGACCGCAAGCTGGCCAACC TGGACGCCATGGCGCCCGAGGTGATTGTCTCTGCCAACATCGGCTGCATTACCCACCTGCAAAGCGGCACCACGACACCG GTGCGGCACTGGGTCGAGGTGCTCAATGAAGCGCTATTGAATCAATAG Protein sequence : MQTQLAPEFQNTPDGRQAEAILRKCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEGETPTRKTQLHLDRCLTCRN CESTCPSGVQYGHLVDIGRKLVDERVPRPVGERAVRWALKEGLPSPLFAPAMKIGQAVRGLLPESLKAKVPPKQPAGQWP TRSHARKMLMLEGCVQPAMMPNINSATARVLDAAGIEVVTAAKAGCCGAVKFHLNDQDGGKLEMRRNIDAWWPYVEQGVE ALVMNASGCGVTVKEYGYILKDDAAYAEKAARISALTRDLSELLPVIAESLQASRPDLAGKIAAGAPRLAFHPPCTLQHG QQLRGGVEQHLGALGFDIKVSGNEAHLCCGSAGTYSVLNPEIAYQLRDRKLANLDAMAPEVIVSANIGCITHLQSGTTTP VRHWVEVLNEALLNQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcF | CAE85243.1 | GlcF protein | Not tested | PAI V 536 | Protein | 2e-110 | 56 |
