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Name : rnhA (Pnap_1680) Accession : YP_981914.1 Strain : Polaromonas naphthalenivorans CJ2 Genome accession: NC_008781 Putative virulence/resistance : Unknown Product : ribonuclease H Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0328 EC number : - Position : 1776416 - 1776901 bp Length : 486 bp Strand : + Note : An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids DNA sequence : ATGACCGATTCAGCAGCAGAGCCCACTATTTCCCAACCACAACACGTCGTGATCTACACCGACGGCGCCTGCAAGGGCAA CCCCGGCCCCGGAGGCTGGGGCGCCTTGCTGGCCTCTGGCGGCACCGAAAAGGAAATCTTCGGCGGCGAGATGGGCACCA CCAACAACCGCATGGAAATGACGGCCGTTATCGAGGCGCTGGCGGCCCTGAAAAAGCCCTGCACCGTGACCCTGTACCTC GACAGCCAGTATGTGCTCAAGGGAATCACCGAATGGATTCACGGCTGGAAGGCCAGGGGCTGGCGCACGGCGGCCAAGGC GCCCGTCAAAAACGTGGACTTGTGGCAGCGGCTCGATGCGCTGCTCGTGTCCAGCGGCCACAGCATCGACTGGCGCTGGG TTCGGGGCCACAACGGCGACCCCGGCAACGAGCGCGCCGATGCGCTGGCCAACAAGGGCGTGGAGCGTGCCCTTGGGCGG CTTTAG Protein sequence : MTDSAAEPTISQPQHVVIYTDGACKGNPGPGGWGALLASGGTEKEIFGGEMGTTNNRMEMTAVIEALAALKKPCTVTLYL DSQYVLKGITEWIHGWKARGWRTAAKAPVKNVDLWQRLDALLVSSGHSIDWRWVRGHNGDPGNERADALANKGVERALGR L |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rnhA | AAO17224.1 | RnhA | Not tested | tcd island | Protein | 8e-33 | 55 |
