|
Name : glcF (Ajs_0168) Accession : YP_984499.1 Strain : Acidovorax sp. JS42 Genome accession: NC_008782 Putative virulence/resistance : Unknown Product : glycolate oxidase iron-sulfur subunit Function : - COG functional category : C : Energy production and conversion COG ID : COG0247 EC number : - Position : 188297 - 189535 bp Length : 1239 bp Strand : + Note : PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF224, cysteine-rich region domain protein; KEGG: pol:Bpro_0188 protein of unknown function DUF224, cysteine-rich region DNA sequence : ATGCAGACCCAGCTCGCACCCCAGTACCAGGGCACGCCCGAAGGGCAGGAGGCCGAGGCCATCCTGCGCAAATGCGTGCA CTGCGGCTTTTGCACTGCCACCTGCCCCACCTACCAGTTGCTGGGCGACGAGTTGGACGGACCGCGCGGGCGCATCTACC TCATCAAGCAGGTGCTGGAAGGGGCCGAGCCCACGCGTAAGACGCAGTTGCACCTGGACCGGTGCCTGACCTGCCGCAAC TGCGAGAGCACCTGCCCGAGCGGCGTGCAGTACGGGCATCTGGTGGACATCGGCCGGCGCATCGTCGAGGAAAAGGTGCC GCGCCCGCGCGGCGAGGCGGCGGCCCGCTGGATGCTCAAGGAAGGGTTACCGTCCCCGCTGTTCGGCCCGGCAATGAAGG TGGGCCAGGCCGTGCGCGGCCTGCTGCCCGAGCGCCTGCGCGCCAAGGTGCCGCCGCGCCAGGATGCCGGCGCCTGGCCC ACGCGCAGCCATGCGCGCAAGGTGCTGCTGCTGGAGGGCTGCGTGCAGCCGTCGATGGCGCCCAACATCAACAGCGCCAC GGCACGCGTGCTGGATGCTGCAGGCATACAGACCGTGGTGGCGCGCGAGGCGGGCTGCTGCGGTGCGGTCAAGTTCCACC TGAACGATCAGGAAGGGGGCCTCGCCCAGATGCGCGCCAACATCGACGCCTGGTGGCCCTACGTGGAACGTGGCGAGGTG GAGGCCATCGTCATGAATGCCTCGGGCTGCGGCGTCACAGTGAAGGAATACGGCCACCTGCTGCGCAACGACGCGCAGTA CGCCGAGAAGGCGGCGCGGGTGAGCGCCCTCACGCGCGATCTGTCGGAACTGCTGCCCGATCTGGTGGAGCGTCTGCGCG GGCGCATCCAGCCTACCGCGGCGCCGCTGGCCTACCACCCGCCCTGCACCCTGCAGCACGGGCAGAAGCTGCGCGGCGGC GTGGAGCGGCACCTGGCGGCGCTGGGCTTCGAGCTGCGCGTGGCGCGCACCGAGTCGCACCTGTGCTGCGGCTCGGCCGG CACCTACTCGGTGCTCAACCCGGAACTGTCGTACCAGCTGCGCGACCGCAAGCTGGGCGCGCTGGGCGAGGCCTTCACCG AGCAGCCGCCTGCGGCCATCCTCTCGGCCAACATGGGCTGCATCACCCACCTGCAAAGCGGCACGGGCATTCCCGTGAAG CACTGGGTGGAGGTGCTGGATGCCGCATTGCTGGCATGA Protein sequence : MQTQLAPQYQGTPEGQEAEAILRKCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEGAEPTRKTQLHLDRCLTCRN CESTCPSGVQYGHLVDIGRRIVEEKVPRPRGEAAARWMLKEGLPSPLFGPAMKVGQAVRGLLPERLRAKVPPRQDAGAWP TRSHARKVLLLEGCVQPSMAPNINSATARVLDAAGIQTVVAREAGCCGAVKFHLNDQEGGLAQMRANIDAWWPYVERGEV EAIVMNASGCGVTVKEYGHLLRNDAQYAEKAARVSALTRDLSELLPDLVERLRGRIQPTAAPLAYHPPCTLQHGQKLRGG VERHLAALGFELRVARTESHLCCGSAGTYSVLNPELSYQLRDRKLGALGEAFTEQPPAAILSANMGCITHLQSGTGIPVK HWVEVLDAALLA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcF | CAE85243.1 | GlcF protein | Not tested | PAI V 536 | Protein | 2e-107 | 58 |
