Gene Information

Name : Ajs_3198 (Ajs_3198)
Accession : YP_987397.1
Strain : Acidovorax sp. JS42
Genome accession: NC_008782
Putative virulence/resistance : Virulence
Product : ATPase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 3382810 - 3385413 bp
Length : 2604 bp
Strand : -
Note : PFAM: AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: pol:Bpro_2201 ATPase AAA-2

DNA sequence :
ATGCGTCTCGATAAATTCACCACGAAGTTCCAAGAAGCGCTGTCTGATGCACAGTCGCTGGCCCTGGGACATGACAACGC
CTACATAGAGCCCGTGCACATGCTGGTGGCCATGCTGCGCCAGGATGAAGGCCCGCGCGCGCTGCTGCAGCGTGCCGGCG
CCAATGTGCCGGGCCTGCTGGCCGCGGCCGAGGCCGCCGTCAAGCGCCTGCCCCAGGTGCAGGGCCAGGACCAGGTGCAG
GGCAGCCCCGAGCTGGGCCGTGTGCTGCAGGCCACCGAGAAGGAGGCCATCAAGCGCGGCGACCAGTTCATCGCCAGTGA
GCTGTTTTTGCTGGCGCTGGTCGACAGCAAGGGCGAGGCCGCGCAGCTGGCCAAGGACAACGGCGTGACCCGCAAGAGCC
TGGAGGCGGCCATCGATGCCGTGCGCGGCGGCCAGAAGGTGGACAGCGCCGAAGCCGAGGGCCAGCGCGAGGCGCTGAAG
AAATACACGCTGGACCTGACCGAGCGCGCCCGCCAGGGCAAGCTGGACCCGGTGATCGGCCGCGACGACGAGATCCGCCG
CGTCATCCAGGTGCTGCAGCGGCGCAGCAAGAACAACCCCGTGCTGATCGGCGAGCCCGGCGTGGGCAAGACCGCCATCG
TCGAGGGGCTGGCCCAGCGCATCGTCGAGGGCGAGGTGCCCGAGACGCTGAAGAACAAGCGCGTGCTGGTGCTGGACATG
GCCGGCCTGCTGGCGGGTGCCAAGTACCGCGGCGAGTTCGAGGAGCGTCTGAAGTCCGTGCTGAAGGAAGTGGCGCACGA
GGAAGGCCGCATCATCCTCTTCATCGACGAGATCCACACCATGGTCGGCGCCGGCAAGGCCGAAGGCGCCATGGACGCGG
GCAACATGCTGAAACCCGCACTGGCGCGCGGCGAGCTGCACTGCATCGGCGCGACCACGCTGGACGAGTACCGCAAGTAC
ATCGAGAAGGATGCGGCGCTGGAGCGGCGCTTTCAGAAGGTGCTGGTGGACGAGCCCAGCGTAGAAGACACCATCGCCAT
CCTGCGCGGCCTGCAGGTGCGCTACGAGGCGCACCACGGCGTGGACATCACCGACCCGGCCATCGTGGCCGCGGCCGAGC
TGTCGCACCGCTACATCACCGACCGCTTTCTGCCCGACAAGGCCATCGATCTGATCGACGAGGCCGCGGCCAAGATCAAG
ATCGAGATCGACTCCAAGCCCGAGTCGATGGACAAGCTCGAGCGCCGCATGATCCAGCTCAAGATCGAGCGCGAGGCGAT
GAAGAAAGAGACCGATGAGGCCTCGCAAAAACGCCTGCAGCTCATCGAGGAAGAGTTGGGCAATGTGGAGCGCGAGTACG
CCGATCTGGAAGAGGTCTGGAAAGCCGAGAAGGCCAGCGCGCAGGGCTCCGAACAGATCCGCAAGGACATCGATGCCATC
CGCACGCAGATCGACGACCTGAAGCGCAAGGGCGACTTCAACAAGGTCGCCGAGCTGCAGTACGGCACGCTGCCCGAGCT
GGAAAAGCGCCTGAAGGAAGCGCAGGACAGCGAGGCCGGCGGGACCGGCACCAAGCACAAGCTGCTGCGCACCCAGGTGG
GTGCCGAGGAAATCGCCGAGGTGGTCAGCCGCGCCACCGGCATTCCCGTGGCCAAGATGATGCAGGGCGAGAAGGACAAG
CTGCTGCACATGGAGGAAAAGCTGCACGAGCGCGTGGTGGGCCAGGACGAGGCGATCTCCGCCGTGGCCAATGCCATCCG
CCGCTCGCGCTCGGGCCTATCAGACCCCAACCGGCCGCTCGGCAGCTTCCTGTTCCTGGGGCCCACGGGCGTGGGCAAGA
CCGAGCTGTGCAAGGCGCTGGCCGGGTTCCTCTTCGACAGTGAAGAGCATCTGGTGCGCATCGACATGAGCGAGTTCATG
GAAAAGCATAGCGTCGCGCGCTTGATTGGTGCGCCTCCCGGCTATGTGGGCTATGAAGAGGGCGGCTACCTGACCGAGGC
CGTGCGCCGCAAGCCCTACAGCGTACTGCTGCTGGATGAGGTGGAAAAGGCCCACCCCGACGTGTTCAACGTGCTGCTTC
AGGTGCTGGACGACGGCCGCCTGACCGATGGCCAGGGGCGCACCGTGGACTTCAAGAACACGGTGATCGTGATGACCAGC
AACATTGGCTCGCACCTGATCCAGGCCATGGTGGGCCAGGATGCCGAGGACATCAAGGAAGCCGTGTGGGGGGAACTCAA
AGGCCATTTCCGACCCGAATTCCTCAACCGCATCGACGAAACGGTGGTTTTCCACGGCTTGGATGCCAAGCACATCGAAG
CGATTGCACGCATTCAGTTGCGTCTGCTGGAGGCGCGGCTGGCCAAAATGGACCTGACCCTGCAGGTGTCGCCGGCCGCG
ATGGGCGAACTGGCCAAGGTGGGGTTCGACCCGGTGTTCGGGGCGCGTCCGCTCAAGCGGGCCATCCAGCAGCGCATCGA
GAACCCGCTGTCCAAGCTGCTGCTGGAGGGCCGCTACCCGCCCAAGAGCGTGATTCCGGTGGATGTCGATCCTGTGACAG
ACCCAGGGGTATTCCACTTCGGCGAGGCCCGCCCCGCGGGGTGA

Protein sequence :
MRLDKFTTKFQEALSDAQSLALGHDNAYIEPVHMLVAMLRQDEGPRALLQRAGANVPGLLAAAEAAVKRLPQVQGQDQVQ
GSPELGRVLQATEKEAIKRGDQFIASELFLLALVDSKGEAAQLAKDNGVTRKSLEAAIDAVRGGQKVDSAEAEGQREALK
KYTLDLTERARQGKLDPVIGRDDEIRRVIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIVEGEVPETLKNKRVLVLDM
AGLLAGAKYRGEFEERLKSVLKEVAHEEGRIILFIDEIHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKY
IEKDAALERRFQKVLVDEPSVEDTIAILRGLQVRYEAHHGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAKIK
IEIDSKPESMDKLERRMIQLKIEREAMKKETDEASQKRLQLIEEELGNVEREYADLEEVWKAEKASAQGSEQIRKDIDAI
RTQIDDLKRKGDFNKVAELQYGTLPELEKRLKEAQDSEAGGTGTKHKLLRTQVGAEEIAEVVSRATGIPVAKMMQGEKDK
LLHMEEKLHERVVGQDEAISAVANAIRRSRSGLSDPNRPLGSFLFLGPTGVGKTELCKALAGFLFDSEEHLVRIDMSEFM
EKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTS
NIGSHLIQAMVGQDAEDIKEAVWGELKGHFRPEFLNRIDETVVFHGLDAKHIEAIARIQLRLLEARLAKMDLTLQVSPAA
MGELAKVGFDPVFGARPLKRAIQQRIENPLSKLLLEGRYPPKSVIPVDVDPVTDPGVFHFGEARPAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 5e-100 41
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 1e-96 41
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 1e-96 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ajs_3198 YP_987397.1 ATPase VFG2076 Protein 9e-104 45
Ajs_3198 YP_987397.1 ATPase VFG2084 Protein 3e-100 42