Gene Information

Name : BMASAVP1_0141 (BMASAVP1_0141)
Accession : YP_989756.1
Strain :
Genome accession: NC_008784
Putative virulence/resistance : Virulence
Product : ECF subfamily RNA polymerase sigma factor
Function : -
COG functional category : K : Transcription
COG ID : COG1595
EC number : -
Position : 133706 - 134215 bp
Length : 510 bp
Strand : -
Note : identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937

DNA sequence : 
ATGCCGGCCAACACTTTGCGTCTGCAGCGGGAGATCGCTGCGCTCTATACCGGTCATCGCGGCTGGCTGCACGGCTGGCT
GTCGAAGAAGCTCGGCTGCGGCGAGCGCGCGGCCGATCTGGTTCACGACACGTTCATCCGCCTGCTCGCACGCGACGAGC
CGATCGACGCGGCCGAGCCGCGCGCGTTCCTGACGACCGTCGCGCAGCACGTGCTGTACAACCACTGGCGGCGCGAGCGG
CTCGAGCGCGCGTATCTCGACGCGCTCGCGCAATGGCCGGAGGCGGTCGCGCCGTCGCCGGAGACACGCGCCGTCCTGTT
CGAGACGCTCGTCGAGGTCGACCGGATGCTCGACGGGCTGCCCGCCGTCGTTCGCCGCGCGTTCCTGCTCGCGCAGCTCG
ACGGCATGACGCACGCGCAGATCGCGGCCGAGCTGCGCGTGTCGCTCGCGACCGTCAAGCGCTACCTGGTGAAAGCGGGC
GCGCAGTGCTACTTCGCGATCGCCGCATGA

Protein sequence : 
MPANTLRLQREIAALYTGHRGWLHGWLSKKLGCGERAADLVHDTFIRLLARDEPIDAAEPRAFLTTVAQHVLYNHWRRER
LERAYLDALAQWPEAVAPSPETRAVLFETLVEVDRMLDGLPAVVRRAFLLAQLDGMTHAQIAAELRVSLATVKRYLVKAG
AQCYFAIAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 3e-32 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BMASAVP1_0141 YP_989756.1 ECF subfamily RNA polymerase sigma factor VFG1049 Protein 1e-32 47