Name : rnhA (Hhal_1585) Accession : YP_001003151.1 Strain : Halorhodospira halophila SL1 Genome accession: NC_008789 Putative virulence/resistance : Unknown Product : ribonuclease H Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0328 EC number : - Position : 1724408 - 1724857 bp Length : 450 bp Strand : - Note : An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids DNA sequence : GTGACCGAGCAGCGCGGCGTGGTGGAGGCATTCACGGATGGGGCCTGTCGAGGTAATCCGGGCCCCGGAGGGTGGGGCGT GCTGCTACGCTACGGCGAGCATGAGCGAGAGCTCTACGGTGGGGAGCCGGAGACCACCAACAACCGCATGGAACTAACCG CGGCGATCCGCGCCCTGGAGGCCTTGGATCGGCCCTGCCGGGTGGTGCTGACCACCGACTCCCAGTACGTACGTCGCGGG ATCACCGAGTGGCTGGAGGGCTGGAAGCGCCGGGGCTGGCGCACCGCATCGCGCAAGCCGGTGCTCAACCAGGACCTGTG GCAACGGCTCGATGAGCTGGCCGCGTACCACCAGGTCGACTGGCACTGGGTGCGTGGCCACGCCGGTCATGCGGAGAATG AGCGTGCCGATGCTCTGGCCAACCAGGGGATCGACGAGCTGGTTGCCTAG Protein sequence : MTEQRGVVEAFTDGACRGNPGPGGWGVLLRYGEHERELYGGEPETTNNRMELTAAIRALEALDRPCRVVLTTDSQYVRRG ITEWLEGWKRRGWRTASRKPVLNQDLWQRLDELAAYHQVDWHWVRGHAGHAENERADALANQGIDELVA |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
rnhA | AAO17224.1 | RnhA | Not tested | tcd island | Protein | 3e-40 | 64 |