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Name : cspD (YE1516) Accession : YP_001005812.1 Strain : Yersinia enterocolitica 8081 Genome accession: NC_008800 Putative virulence/resistance : Unknown Product : cold shock-like protein Function : - COG functional category : K : Transcription COG ID : COG1278 EC number : - Position : 1694613 - 1694870 bp Length : 258 bp Strand : - Note : Similar to Escherichia coli, and Escherichia coli O157:H7 cold shock-like protein CspD cspD or cspH or b0880 or z1117 or ecs0966 SWALL:CSPD_ECOLI (SWALL:P24245) (74 aa) fasta scores: E(): 3.1e-25, 84.93 38d in 73 aa, and to Yersinia pestis cold shock-like DNA sequence : ATGGAGACGGGTACTGTTAAATGGTTCAACAATGCCAAAGGTTTTGGCTTCATTTGCCCTGAGGGCGGCGGCGAAGATAT ATTCGCTCACTATTCGACTATCCAGATGGATGGCTACCGAACGTTAAAAGCCGGTCAAATGGTTAACTTTGATGTCCATC AAGGGCCAAAAGGGAACCATGCCAGCCTGATTGTACCACTAGGATTAGATGTGGTACTGCAAGAAGCCATACCGCAGGAA CACGCTGCATTGGCCTGA Protein sequence : METGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQMVNFDVHQGPKGNHASLIVPLGLDVVLQEAIPQE HAALA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAO18076.1 | unknown | Not tested | TTSS locus | Protein | 3e-15 | 52 |
