Gene Information

Name : YE1972 (YE1972)
Accession : YP_001006225.1
Strain : Yersinia enterocolitica 8081
Genome accession: NC_008800
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2152586 - 2152846 bp
Length : 261 bp
Strand : -
Note : Similar to many including: Escherichia coli, and Escherichia coli O157:H7 hypothetical protein precursor YcfR or B1112 or Z1751 or Ecs1490 SWALL:YCFR_ECOLI (SWALL:P75953) (85 aa) fasta scores: E(): 7.1e-12, 57.47 id in 87 aa and to Yersinia pestis putativ

DNA sequence : 
ATGAAAAATATTAAATATATTATCCCTGCGTTGGCCCTTTCTTTCGCATCATTTGCCAGTGTTGCTGCCACACAAATCCA
GCACGCACCAGCAACAGGCTTGAATGAGATTGGTACCGTTGCCGCCAGCAATGCCGGTACATTAACTGAATTAGAAAACG
CTCTGGCGAAAAAAGCAGATGAAGCTGGCGCAACCTCATACCTGATCACCTCTGCTACCGGCAATAACAAATTGCACGGT
ACGGCGGTCATTTACCGCTAA

Protein sequence : 
MKNIKYIIPALALSFASFASVAATQIQHAPATGLNEIGTVAASNAGTLTELENALAKKADEAGATSYLITSATGNNKLHG
TAVIYR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3599 NP_755474.1 hypothetical protein Not tested PAI I CFT073 Protein 1e-04 41
ECUMN_3347 YP_002414023.1 hypothetical protein Not tested Not named Protein 1e-04 41
r10 AAC61724.1 R10 Not tested PAI I CFT073 Protein 9e-05 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YE1972 YP_001006225.1 hypothetical protein BAC0049 Protein 7e-11 54
YE1972 YP_001006225.1 hypothetical protein BAC0446 Protein 7e-05 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YE1972 YP_001006225.1 hypothetical protein VFG1720 Protein 4e-05 41