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Name : YE1998 (YE1998) Accession : YP_001006250.1 Strain : Yersinia enterocolitica 8081 Genome accession: NC_008800 Putative virulence/resistance : Virulence Product : RTX family toxin transporter Function : - COG functional category : V : Defense mechanisms COG ID : COG2274 EC number : - Position : 2180469 - 2182595 bp Length : 2127 bp Strand : + Note : - DNA sequence : ATGGGAAATCATATTCACTCTTCTTTGGTCTGTGCTGCGCGATTACTTCGCTTAGCAGGGGTTAATGCGGAACCAGTAGA AACATTGGGTAAAAATGCTGCTATTGATCTTTCGACCAGGGGAACACTCGCCTCATTGCAACAATATTTATCACAGTTAT CACGTGCGACATCGACTCGTTTTAAAGTGAAAAAACGGGCATTAAATAAAATAAAACCTGAGCAGTTACCACTGGCATTT CGTGATGTAGAGGGCAGATTTATCTTATTAGCACGATTAAATGATAATGAGGCACTGCTGCAACATTCTGATAGCAATAA GCCACAAATAATTAGCTATCAGTTACTGAGTGATATGTGGAGTGGGGTGGTATTCTATTGTAGCCATTCACGCTTTGATA TCCGGTGGTTTATCCCCGTTTTATTACGCCATCGTAAATCCTTGATCCAAGTGCTGGTGTTATCAATGCTATTGCAGTTT CTGGCATTGATATCACCACTTTTCTTTCAGGTTATTATGGATAAGGTCCTGGTGCATAATGCACTAACGACTCTCGACGT GTTAATTGTCGTATTATTGGTGGTAGGAGTCTATGAGGTTGTACTGAAGTTTTTGCGTGAATATATTTTTAGTCATACCA CAACTCGAGTGGATATTTTATTGGGAGGTAAATTATTTAATCACTTAATCAAATTACCATTAAGTTATTTTAAGCAACGC CATGTCGGGAATATTGTTGCGCGAGTCTGTGAACTGGATAATATTCGTGAGTTTATTACCGGGACAGCACTTACCTTATG TGTTGATGTTGTTTTTACCCTCATCTTATTTATTGTTATGTGGTGTATTTCGCCGCTCCTGACATTAATCATACTGGCCA CACTGCCGCTATATCTGTTATTAGCGGCATTAACCACCCGTCCCTTGCAAAAGAAAGTTGAAGTGTTGTGCAGTTGTGCG GCTCAGAATGGTGCATTTTTAACCGAAACGGTCTCCGGCGTTGAAACCGTTAAAAGCCTGGCCCTGGAACCGCAGATGCA GCAGCGGTGGGAGACGCAAACGCGGGACTACGCTCAAGCTAATTTTCAGGTGCAAAACCTGCAAAACTTCAGCAGCCAGT GTGCTCAGTTACTACAAAAATTAGCCAGTGCGCTAGTGATTGTTATTGGGGCATATCAAGTCATGTCTGTGCAACTGAGT ATCGGGCAGTTAATCGCTTTTAATATGCTGGCGGTGCAAGCATTAATGCCAATGAGTAAGTTGGTTGATTTATGGCAGCA GAGTATACGGGCGAAAGTTGGGCTGATGCTGATATCCGATATTTTAAGTTTGCCGGTCGAGCAAGCCACGGGGGGCGCTC CGTCTAATCGCCAAATTAACGGTGATATCACCCTGGATAATGTGGTTTTCCGTTATCGCCCCGATCTTGATCCTGTATTG CGTCATTTCTCATTATCACTGCGCGCGGGAGAGCATATCGGTCTGGTCGGCCCGTCAGGTTCAGGCAAAAGTACGGTCGC GCGGCTATTACAGCGCCTTTATATTGCTGAACAGGGGGTTATTAATATTGATGGTTACTCGATAAATCATTTCTCTCCTG AGTATCTACGGCGTCAGGTCGGTGTGGTTATGCAAGAAAACTACCTGTTTAACCGCACTGTTCGTGAAAATATTGCCTAT TCTCGGCCAACCGCTTCACTGAGTGATGTCGTTGATGTGGCCGGTCTGGCGGGCGCGCACGATTTTATTCTGGCCTTGCC GCTAGGGTATGACACCGTGCTGTCTGAAGGCGGGGCATCCCTTTCTGGTGGGCAACGTCAGCGTATTGCGATTGCTCGTA CTCTACTGGCCAATCCCCGTGTATTGATTTTTGATGAGGCGACCAGTGCTCTGGATGATGAGTCGCAAGCTGAAGTTCAG AAAAATATGTCCCGCATTATTGCCAATCGCACCGTCATTACCATTGCTCACCGCCTTTCGACGGTGCGGCACTGTCATCG TATTGCCGTCATAAAGCAAGGTTGTGTGGCTGAGCTGGCAAATCATGAGCAACTGTTGGCGCAGAACGGTATCTATGCCC AACTTTGGCAACAGCAAGCCGACTTTAGCCATGAGGAATCAAAATGA Protein sequence : MGNHIHSSLVCAARLLRLAGVNAEPVETLGKNAAIDLSTRGTLASLQQYLSQLSRATSTRFKVKKRALNKIKPEQLPLAF RDVEGRFILLARLNDNEALLQHSDSNKPQIISYQLLSDMWSGVVFYCSHSRFDIRWFIPVLLRHRKSLIQVLVLSMLLQF LALISPLFFQVIMDKVLVHNALTTLDVLIVVLLVVGVYEVVLKFLREYIFSHTTTRVDILLGGKLFNHLIKLPLSYFKQR HVGNIVARVCELDNIREFITGTALTLCVDVVFTLILFIVMWCISPLLTLIILATLPLYLLLAALTTRPLQKKVEVLCSCA AQNGAFLTETVSGVETVKSLALEPQMQQRWETQTRDYAQANFQVQNLQNFSSQCAQLLQKLASALVIVIGAYQVMSVQLS IGQLIAFNMLAVQALMPMSKLVDLWQQSIRAKVGLMLISDILSLPVEQATGGAPSNRQINGDITLDNVVFRYRPDLDPVL RHFSLSLRAGEHIGLVGPSGSGKSTVARLLQRLYIAEQGVINIDGYSINHFSPEYLRRQVGVVMQENYLFNRTVRENIAY SRPTASLSDVVDVAGLAGAHDFILALPLGYDTVLSEGGASLSGGQRQRIAIARTLLANPRVLIFDEATSALDDESQAEVQ KNMSRIIANRTVITIAHRLSTVRHCHRIAVIKQGCVAELANHEQLLAQNGIYAQLWQQQADFSHEESK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hlyB | NP_755448.1 | hemolysin B | Virulence | PAI I CFT073 | Protein | 1e-117 | 46 |
| hlyB | CAD33760.1 | hemolysin B | Virulence | PAI I 536 | Protein | 7e-118 | 46 |
| hlyB | CAD42038.1 | HlyB protein | Virulence | PAI II 536 | Protein | 7e-118 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| YE1998 | YP_001006250.1 | RTX family toxin transporter | VFG0841 | Protein | 2e-116 | 49 |
| YE1998 | YP_001006250.1 | RTX family toxin transporter | VFG1501 | Protein | 4e-118 | 46 |
| YE1998 | YP_001006250.1 | RTX family toxin transporter | VFG0907 | Protein | 6e-118 | 46 |
| YE1998 | YP_001006250.1 | RTX family toxin transporter | VFG1557 | Protein | 4e-118 | 46 |
| YE1998 | YP_001006250.1 | RTX family toxin transporter | VFG1269 | Protein | 9e-120 | 46 |
