Gene Information

Name : pduA (YE2728)
Accession : YP_001006919.1
Strain : Yersinia enterocolitica 8081
Genome accession: NC_008800
Putative virulence/resistance : Virulence
Product : putative propanediol utilization protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 2965247 - 2965543 bp
Length : 297 bp
Strand : +
Note : Similar to Salmonella typhimurium, and Salmonella typhi propanediol utilization protein PduA or STY2243 SWALL:PDUA_SALTY (SWALL:P37448) (94 aa) fasta scores: E(): 5.8e-26, 89.01 38d in 91 aa, and to Listeria innocua hypothetical protein LIN1123 SWALL:Q92C

DNA sequence : 
ATGCAACAAGAAGCACTAGGAATGGTGGAAACCAAAGGGTTGGTTGCGGCCATCGAGGCTGCTGACACCATGGTGAAATC
GGCCAATGTGACGTTGGTAGGCTACGAAAAAATTGGCTCCGGTCTGGTCACTGTCATCGTCCGTGGTGATGTCGGAGCGG
TTAAGGCGGCCACTGATGCAGGCGCTATCGCGGCTGCCAACATAGGTGAAGTGAAATCAACCCATGTGATCCCACGGCCA
CATACCGATGTTGAGGCCTTTCTTCCCAAGGGAAACTTACCAAAGGGAAATAGCTAA

Protein sequence : 
MQQEALGMVETKGLVAAIEAADTMVKSANVTLVGYEKIGSGLVTVIVRGDVGAVKAATDAGAIAAANIGEVKSTHVIPRP
HTDVEAFLPKGNLPKGNS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 2e-14 67
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 1e-13 64
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 2e-13 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pduA YP_001006919.1 putative propanediol utilization protein VFG1596 Protein 7e-15 67
pduA YP_001006919.1 putative propanediol utilization protein VFG1598 Protein 4e-14 64
pduA YP_001006919.1 putative propanediol utilization protein VFG1597 Protein 9e-14 62