Gene Information

Name : YE0556 (YE0556)
Accession : YP_001004916.1
Strain : Yersinia enterocolitica 8081
Genome accession: NC_008800
Putative virulence/resistance : Virulence
Product : putative iron transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4772
EC number : -
Position : 639479 - 641635 bp
Length : 2157 bp
Strand : +
Note : Similar to Escherichia coli iron(III) dicitrate transport system FecA or b4291 SWALL:FECA_ECOLI (SWALL:P13036) (774 aa) fasta scores: E(): 8.4e-78, 44.65 id in 701 aa, and to Pseudomonas aeruginosa probable Tonb-dependent receptor Pa3268 SWALL:Q9HYX3 (EMB

DNA sequence :
ATGTTAACGTTTTCCCGTTTGTCTCTGTTGGCCGCCTCCGTCGCGCTGGCATTACCCGTTTTTGCCGCAGAGAAATCTTC
TCCGCCAGTGACTGATAACTCTGCCGAAACTAACACGAATAAAAGTGACACACTCTCAGTGGTCGGTAACTGGCTTGATA
ATACGGATAACAGCACGGTTGTGTTGAATCACCCCGGTGCACGCACTATCGTTACCCAGCAACGTATTCACGAAAAGGGT
GCTCAGACAGTGGGGGATTCACTACGTGGTATTCCTGGTGTTCAAGTGCGTGAAAGTAATGGCACGGGCGGCAGTGATAT
TTCGCTCAATGTGGGGGTTCGCGGCTTAACCTCTCGCTTATCTCCGCGCTCAACTATCTTGATGGACGGTATCCCGCTAG
CAGTAGCACCTTATGGACAGCCACAGCTATCAATGGCTCCACTTTCTATTGGTAACCTGCAATCTATCGATGTGATTCGT
GGTGGCGGAGCAGTACGCTATGGGCCGCAAAACGTAGGCGGAATCATCAATTTTAATACCAAGGCTATTCCGGAAGACTT
CAGTGGTGCCGTTAGCGCACAGACGCAAGGTGCTAGTCATGGCGGTTTAAAAACCTTGAGCAGCGCATCATTAGGCGGTA
CGGCTGATAATGGTTTTGGCGCGGCATTGCTCTATTCAGGTCTGCATGGTCAAGGGTATCGTGACAATAACGACAATACT
GATATCGATGATTTTATGCTGAAAACCCGTTATCAGTTCACCGAACATGACGAATTGCAGGCCAATTTTCATTATTATGA
AGCACATGCTGGCATGCCGGGTGGGTTAACCAGTGCACAATATGCCCAGAATCCTTTCCAGTCGACCCGCCCTTATGACC
AGTTTGATGGGCGTCGCCGTGATATGTCATTCAAATATATCCACCAGGAAGATGATCGCCAGTTTGAGTTGCTGACATAT
TTCACCAAAAGTTTCCGTGGCAGCAATATTGAATCTGAAGGGAGCGGTGCTAACCTCGGTCAGAGACGCATGGTGGCTTA
CCCGCGTAATTACACCACTTATGCCATTGAACCCAGCTATTCGCAGTTGTTTAGAATGGGCAGTAGCTCCCATGAGGTTA
CTGTTGGTTACCGCTATCTGAATGAAACCATGGATGAGAAAGCCTATCGCTCCCCTTGGTATAACCCTGCGACAGTGACT
TCAATGCCCGCCACACCACAGTATTATCAGCACACCTCAGGCGGAACCGAAGCGCATGCCGTCTATATCGATGATGCTAT
CAATGTGTCTGACTGGACCATCACACCCGGGCTGCGTTATGAGAATATCCGCACCAATGTAGATGATTCTTTTGCCAATA
CTCGACGTGAACAGCACTACAGTGAGCCGCTACCTTCACTTAATGTGATGTATCATATGTCCGATGAATGGAAGCTGTTT
GCCAATGCCAACACTTCCTTTGGCAGCATGCAATATTTCCAGCTCAGCAAAGGTGGTAATGGTAATGCACCGGCACCGGG
CTTGACAGCTGAAAAAGCACATAGCTATGAAATCGGTACTCGTTTTGATGACACGGTAATGACCGGTGAATTGACCCTGT
TCTATATTGATTTCGATAATCAGCTGCAATACATCAGCAATGATATTGGCTGGACAAATCTGGGAGCGACAACTCATAAA
GGTGTGGAGTTGGCATTCAGTTATGATTTAAGTGAATTCAATTCAGCACTGAATGGGGTAAGTGTTTACTCCAGCTACAC
CTATACCAAAGCAACCACCAAAAGTGGTGATTTCGCCGGTAAGGACTTACCGTTCTATTCACGTCAGGTTTATACCGTGG
GTACCCGTTATGAAACCGGTAATTGGGTCTGGAACCTGGATAGTTATGCACAATCTCAGCAACAGTCACCGGGTTCTGGC
CCGCAGTATATGACGACGGAGAGTGCCGATGGCCAGTTTGGTACTATTCCGGGATACATGGTGTGGAATACCCGCGCTGA
ATATAATTTCGGGCCAGCCTGGTCAAATCTAACATTGGGCGCAGGGGTAAAAAACCTGTTTGATCAACGCTATTTCACGC
GTTCCAATGATAACAACGCAGGTAAGTATGTCGGTGAGCCACGAACCTTCTTTGTGCAGGGGTCAGTTGCCTTCTAA

Protein sequence :
MLTFSRLSLLAASVALALPVFAAEKSSPPVTDNSAETNTNKSDTLSVVGNWLDNTDNSTVVLNHPGARTIVTQQRIHEKG
AQTVGDSLRGIPGVQVRESNGTGGSDISLNVGVRGLTSRLSPRSTILMDGIPLAVAPYGQPQLSMAPLSIGNLQSIDVIR
GGGAVRYGPQNVGGIINFNTKAIPEDFSGAVSAQTQGASHGGLKTLSSASLGGTADNGFGAALLYSGLHGQGYRDNNDNT
DIDDFMLKTRYQFTEHDELQANFHYYEAHAGMPGGLTSAQYAQNPFQSTRPYDQFDGRRRDMSFKYIHQEDDRQFELLTY
FTKSFRGSNIESEGSGANLGQRRMVAYPRNYTTYAIEPSYSQLFRMGSSSHEVTVGYRYLNETMDEKAYRSPWYNPATVT
SMPATPQYYQHTSGGTEAHAVYIDDAINVSDWTITPGLRYENIRTNVDDSFANTRREQHYSEPLPSLNVMYHMSDEWKLF
ANANTSFGSMQYFQLSKGGNGNAPAPGLTAEKAHSYEIGTRFDDTVMTGELTLFYIDFDNQLQYISNDIGWTNLGATTHK
GVELAFSYDLSEFNSALNGVSVYSSYTYTKATTKSGDFAGKDLPFYSRQVYTVGTRYETGNWVWNLDSYAQSQQQSPGSG
PQYMTTESADGQFGTIPGYMVWNTRAEYNFGPAWSNLTLGAGVKNLFDQRYFTRSNDNNAGKYVGEPRTFFVQGSVAF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecA AAL08456.2 FecA Not tested SRL Protein 2e-132 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YE0556 YP_001004916.1 putative iron transporter VFG1047 Protein 9e-133 44