Gene Information

Name : ccmK (P9515_06131)
Accession : YP_001010929.1
Strain : Prochlorococcus marinus MIT 9515
Genome accession: NC_008817
Putative virulence/resistance : Virulence
Product : carboxysome shell protein CsoS1
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 549224 - 549535 bp
Length : 312 bp
Strand : +
Note : COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein [Secondary metabolites biosynthesis, transport, and catabolism / Energy production and conversion]

DNA sequence : 
ATGGCTACAGAAACAATGGGTATCGCACTCGGCATGATCGAGACACGCGGACTTGTACCTGCAATCGAAGCAGCAGACGC
AATGACCAAGGCAGCAGAAGTTCGTCTTATTGGTCGTGAATTCGTAGGTGGCGGTTATGTCACAGTTTTAGTTAGAGGAG
AAACAGGCGCTGTTAACGCAGCAGTTAGGGCTGGAGCTGATGCTTGTGAGAGAGTTGGTGACGGTCTTGTTGCGGCTCAC
ATCATTGCTCGTCCTCATAGAGAGGTTGAGCCAGCTCTTGGTAATGGCGATTTCCTTGGTCAAAAGGACTAA

Protein sequence : 
MATETMGIALGMIETRGLVPAIEAADAMTKAAEVRLIGREFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAH
IIARPHREVEPALGNGDFLGQKD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 2e-11 60
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 4e-12 54
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 2e-11 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ccmK YP_001010929.1 carboxysome shell protein CsoS1 VFG1596 Protein 8e-12 60
ccmK YP_001010929.1 carboxysome shell protein CsoS1 VFG1597 Protein 2e-12 54
ccmK YP_001010929.1 carboxysome shell protein CsoS1 VFG1598 Protein 1e-11 52