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Name : clpB (P9303_18321) Accession : YP_001017839.1 Strain : Prochlorococcus marinus MIT 9303 Genome accession: NC_008820 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease Hsp 100, ATP-binding subunit ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : 3.4.21.92 Position : 1589658 - 1592249 bp Length : 2592 bp Strand : - Note : COG542 ATPases with chaperone activity, ATP-binding subunit [Posttranslational modification, protein turnover, chaperones] DNA sequence : ATGCAACCTACGGCGGATCAATTTACCGAAAAAGGCTGGGCAGCAATCGTTTTGGCCCAACAACTTGCCCAGCAACGCAA GCACCAGCAACTGGAAACAGAGCATTTGTTGTTGTCACTGCTAGAGCAAAATGCTTTGGCAGGAAGAATCCTAGAAAAAG CAGGTGTGTCGATCGGCAACTTGCAAACAGCCGTGGAGGCACACCTGCATGAACAGCCCACTCTGCAGGCAGCGCCAGAC TCTGTCTATCTGGGCAAAGGAGTCAATGATCTGCTCGATCAAGCTGATAAACATAAGCAAGCTTTTGGCGATGGTTTCAT CTCAATTGAACATCTGTTACTTGCATTGGCCGGGGACAATCGTTGCGGCCGCAAGCTGCTCAATCAAGCGGGCGTGGATG CGGGCAAACTAAAGGTTGCAATTGACGCGGTACGCGGAAACCAGAAGGTGACCGATCAGAACCCAGAAGGAACTTACGAA TCTCTCGAAAAATATGGCAGAGACCTGACTGCTGCTGCTCGCGAAGGCAAACTCGACCCTGTCATCGGAAGGGACGATGA GATTCGACGCACGATTCAGATTCTTAGTAGGCGCACCAAAAACAACCCTGTCCTCATTGGGGAGCCAGGGGTGGGAAAAA CCGCAATTGTTGAAGGCCTCGCACAACGGATTGTTAATGGCGATGTACCTGCAGCCCTTCAGAACAGACAGTTAATCGCC CTTGATATGGGTGCTTTGATTGCAGGGGCAAAATATCGAGGTGAATTCGAAGAGCGACTCAAGGCAGTGCTCAAAGAAGT TACCGCCTCTGAAGGACAAATCGTACTTTTTATTGATGAAATCCATACCGTTGTAGGAGCTGGAGCTACCGGTGGGGCAA TGGATGCCAGCAATCTGCTTAAGCCAATGCTGGCTCGAGGGGAACTGCGCTGCATTGGTGCAACGACCCTCGATGAGCAC CGACAGCACATCGAAAAAGACCCCGCTTTAGAAAGAAGATTCCAGCAAGTGCTTGTGGATCAACCCACCGTGCAAGACAC GATCTCCATCCTGCGTGGTCTCAAAGAACGCTACGAAGTGCATCATGGTGTGCGCATTGCTGATAACGCCCTGGTTGCTG CAGCTGTGCTCAGTAGCCGATATATTGCCGATCGTTTTTTGCCAGATAAAGCCATCGATTTGATGGATGAATCTGCTGCA CGACTAAAAATGGAAATCACCTCCAAGCCGGAGGAAATCGATGAAATCGATCGCAAGATTGTGCAGCTCGAGATGGAGAA GCTTTCCTTAGGACGTGAGTCCGACTCCGTTAGTAAGGAAAGATTGGAAAAACTAGAACGCGAGCTTGCTGAATTAGCAG AGCAACAAAGTGCGCTCAATGCACAGTGGCAACAAGAAAAAGGTGCGATTGACGACCTTTCTTCGCTCAAAGAAGAAATC GAAAGGGTGCAATTGCAAGTTGAGCAAGCCAAGCGCAGCTACGACCTCAACAAAGCAGCTGAACTGGAGTACGGAACTCT GGCGGGATTGCAGAAACAACTCAGCGAGAAAGAAACTGCCCTGGCCCAAGATGGAGAGGCAGGCGATAAATCACTGCTGC GAGAGGAGGTTACGGAAGACGATATTGCTGATGTCATCGCTAAATGGACCGGGATTCCTGTCGCCAAGCTTGTGCAGTCG GAAATGGAAAAGCTGCTGGGACTTGAAGCAGAACTCCACCAACGTGTGATTGGCCAAGAACAGGCTGTGCAAGCTGTTGC GGATGCGATTCAGCGTTCTAGGGCAGGTTTAAGTGATCCCAACCGCCCGATCGCAAGTTTTTTATTTCTAGGCCCCACTG GTGTAGGTAAAACGGAGCTATCCAAGGCATTGGCCTCTCAACTGTTTGACAGCGAGGCGGCTTTGGTGCGAATCGATATG TCTGAGTATATGGAGAAGCACAGTGTAAGCAGACTGATCGGGGCACCCCCGGGTTATGTCGGCTATGAGGCTGGTGGACA GCTCACCGAAGCCGTACGCAGACGCCCTTATGCGGTAATCCTGTTCGATGAAGTGGAGAAGGCACACCCAGATGTGTTCA ATGTGATGTTACAGATCCTCGATGATGGACGTGTTACCGATGGTCAGGGTCGCACAGTTGATTTTACAAATACGGTGCTA ATTCTTACCAGTAATATTGGCAGCCAGTCGATTCTCGACTTGGGAGGCGATGATAGTCAATACGGGGAAATGGAGCGTCG AGTTCATGATGCTTTGCACGCTCATTTTAGGCCTGAGTTTCTCAACCGCCTGGATGAAACAATCATCTTTCATAGCCTCA GGCGCGAGGAACTGCGTCAGATCGTTGCCCTTCAGGTCAATCGGCTGCGTGAGCGTCTTGGCGATCGCAAGCTTGGCCTA GAGATCAGTGATACAGCAGCTGATTGGCTCGCTAATGCTGGCTATGACCCTGTTTATGGGGCCAGACCCCTCAAGCGAGC GATCCAACGCGAGCTTGAAACTCCAATAGCCAAAAGTATCCTGGCTGGCTTTTATGGAGATAGTCAGATTGTGCATGTGG ATGTGGACGAGGAGCGTCTGAGCTTTCGATAA Protein sequence : MQPTADQFTEKGWAAIVLAQQLAQQRKHQQLETEHLLLSLLEQNALAGRILEKAGVSIGNLQTAVEAHLHEQPTLQAAPD SVYLGKGVNDLLDQADKHKQAFGDGFISIEHLLLALAGDNRCGRKLLNQAGVDAGKLKVAIDAVRGNQKVTDQNPEGTYE SLEKYGRDLTAAAREGKLDPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGDVPAALQNRQLIA LDMGALIAGAKYRGEFEERLKAVLKEVTASEGQIVLFIDEIHTVVGAGATGGAMDASNLLKPMLARGELRCIGATTLDEH RQHIEKDPALERRFQQVLVDQPTVQDTISILRGLKERYEVHHGVRIADNALVAAAVLSSRYIADRFLPDKAIDLMDESAA RLKMEITSKPEEIDEIDRKIVQLEMEKLSLGRESDSVSKERLEKLERELAELAEQQSALNAQWQQEKGAIDDLSSLKEEI ERVQLQVEQAKRSYDLNKAAELEYGTLAGLQKQLSEKETALAQDGEAGDKSLLREEVTEDDIADVIAKWTGIPVAKLVQS EMEKLLGLEAELHQRVIGQEQAVQAVADAIQRSRAGLSDPNRPIASFLFLGPTGVGKTELSKALASQLFDSEAALVRIDM SEYMEKHSVSRLIGAPPGYVGYEAGGQLTEAVRRRPYAVILFDEVEKAHPDVFNVMLQILDDGRVTDGQGRTVDFTNTVL ILTSNIGSQSILDLGGDDSQYGEMERRVHDALHAHFRPEFLNRLDETIIFHSLRREELRQIVALQVNRLRERLGDRKLGL EISDTAADWLANAGYDPVYGARPLKRAIQRELETPIAKSILAGFYGDSQIVHVDVDEERLSFR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 2e-99 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_001017839.1 | ATP-dependent Clp protease Hsp 100, ATP-binding subunit ClpB | VFG2084 | Protein | 5e-108 | 44 |
| clpB | YP_001017839.1 | ATP-dependent Clp protease Hsp 100, ATP-binding subunit ClpB | VFG2076 | Protein | 2e-121 | 43 |
