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Name : secD (Mpe_A0277) Accession : YP_001019474.1 Strain : Methylibium petroleiphilum PM1 Genome accession: NC_008825 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 300488 - 302368 bp Length : 1881 bp Strand : + Note : part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of DNA sequence : ATGAACCGCTACCCATGGTGGAAGTACGCGATCCTGGCGATCGCGCTGCTGGTCGGGCTGGTCTATACCTTGCCCAACTT CTTCGGTGAGGCACCTGCCGTGCAGGTGTCGAGTGGCAAGGCCACGCTGAAGGTCGACGCGACGGTGGTGCCGCGCGTCG AGCAGGCCTTGCAGGCGGCCGGACTGCAGGCCGATTTCGTGCAACTCGACGGTGCGTCGATCAAGGCACGCTTTCGCGAC ACCGATGCGCAGATCAAGGCCAAGGACGCCATTGCCAAGGCCTTGAACCCTGACCCGGCCGATCCGGGCTACATCGTCGC GCTGAACCTGCTGTCGCGTTCACCGACCTGGCTGCGATCGCTGCATGCGCTGCCGATGTACCTGGGCCTCGACCTGCGCG GCGGGGTGCATTTCCTGATGCAGGTCGACATGAAGGCGGCGCTCACCAAGCGCGCCGATGTGCTGACCGGCGACATCCGC AGCCTGCTGCGCGACAAGAGCATCCGCCACGCCGGCATCGCGCGTGAAGGCAACACGGTCACGATCGCCTTCCGCGACGC GGCGACGCGCACCGCCGCGCGGGCGGTGCTGACCGAGCCGCTGCCCGACCTGCAGTGGTCCGAGGCGGCCCGTGACAGTG AATTCACGCTGACCGGCAGCCTGAAGGCCGAGGCGGCGCGCCGCGTGCAGGATCAGGCCATCAAGCAGAACATCACCACG CTGCACAATCGGATCAATGAACTCGGCGTGGCCGAGCCGGTGATCCAGCAGCAGGGCGCGGACCGCGTGGTGGTGCAGTT GCCGGGCGTGCAGGACACGGCGAAGGCGAAGGACATCATCGGCCGGACCGCGACGCTCGAACTGCGCATGGTGGACGACA GCGCCGAGGCGGCCGCCGCCGCGACCGGCAGCGGGCCGGTGCCGTTCGGGGCCGAGCGCTACGTGGAGCGCGGCGGTGCC GCGCTGATCGTCAAGCGCCAGGTCATCCTCACCGGTGACAGCCTGACCGACGCGCAACCCGGTTTCGACGGCCAGACGCA GGAACCGGCCGTGCACCTGACCGTGGACGCCAAGGGCGCACGCATCATGCGCGACGTCTCGCGCGACAACGTCGGCAAGC GCATGGCGATCCTGCTGTTCGAGAAGGGCAAGGGCGAGGTCGTGACGGCTCCGGTGATTCGCGGTGAACTCGGCTCGCGC TTCCAGATCTCGGGCCGCATGACGACGCAGGAGGCGAGCGATACGGCGCTGCTGCTGCGTGCCGGTTCGCTGGCGGCGCC GATGGAGATCGTCGAGGAGCGGACCATCGGTCCGAGCCTTGGCGCCGAGAACATCGACAAGGGCTTCAACAGCGTGATCT ACGGCTTTGCCGCGATTGCCGCGTTCATGTGCGCCTACTACCTGCTGTTCGGCGTGTTCTCGACCATTGCGCTGGCGGTG AACCTGCTGCTGCTGGTGGCGGTGCTGTCGATGCTGCAGGCCACGCTCACATTGCCCGGCATCGCGGCGATCGCGCTGAC GCTGGGGATGGCGATCGACGCCAACGTGCTGATCAACGAACGGGTGCGCGAGGAACTGCGCGCCGGCGCTTCGCCGCAGG CCGCGATCCACACCGGCTACGAGCGCGCCTGGGCCACGATCTTCGATTCGAACATCACCACGCTGATTGCGGGCGTTGCG CTGCTGGCCTTCGGCTCAGGTCCTGTCCGCGGCTTCGCGGTTGTGCACTGTCTCGGCATCCTGACCTCGATGTTCTCCGC GGTGCTGTTCTCGCGTGGTCTGGTGAATCTCTGGTACGGGCGGCGCAAGAAGCTCAAGGGCGTGTCGATCGGTCAGGTAT GGCGTCCGGACGGCGCTGTGCCGCCGGCGGCCCAGGCCTGA Protein sequence : MNRYPWWKYAILAIALLVGLVYTLPNFFGEAPAVQVSSGKATLKVDATVVPRVEQALQAAGLQADFVQLDGASIKARFRD TDAQIKAKDAIAKALNPDPADPGYIVALNLLSRSPTWLRSLHALPMYLGLDLRGGVHFLMQVDMKAALTKRADVLTGDIR SLLRDKSIRHAGIAREGNTVTIAFRDAATRTAARAVLTEPLPDLQWSEAARDSEFTLTGSLKAEAARRVQDQAIKQNITT LHNRINELGVAEPVIQQQGADRVVVQLPGVQDTAKAKDIIGRTATLELRMVDDSAEAAAAATGSGPVPFGAERYVERGGA ALIVKRQVILTGDSLTDAQPGFDGQTQEPAVHLTVDAKGARIMRDVSRDNVGKRMAILLFEKGKGEVVTAPVIRGELGSR FQISGRMTTQEASDTALLLRAGSLAAPMEIVEERTIGPSLGAENIDKGFNSVIYGFAAIAAFMCAYYLLFGVFSTIALAV NLLLLVAVLSMLQATLTLPGIAAIALTLGMAIDANVLINERVREELRAGASPQAAIHTGYERAWATIFDSNITTLIAGVA LLAFGSGPVRGFAVVHCLGILTSMFSAVLFSRGLVNLWYGRRKKLKGVSIGQVWRPDGAVPPAAQA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 9e-91 | 42 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 5e-91 | 42 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 5e-91 | 42 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 5e-91 | 42 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 4e-91 | 42 |
