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Name : clpB (BMA10229_A0030) Accession : YP_001026039.1 Strain : Genome accession: NC_008836 Putative virulence/resistance : Unknown Product : ATP-dependent Clp protease, ATP-binding subunit ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 27198 - 29795 bp Length : 2598 bp Strand : + Note : identified by match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728 DNA sequence : ATGAGAATCGACAAGCTCACCACCAAATTCCAAGAGGCGCTCTCGGATGCGCAGAGTTTCGCCGCCGGGCGCGACAACCA GTACATCGAACCCGTCCACGTGCTGGCCGCGCTCGTCGCGCAGCAGGACGGCTCCGCGCGCTCGCTGCTGTCGCGTGCGG GCGTGCACATCCAGGCGTTGCAAGGCGCGCTCAACGAAGCGATCTCGCGCCTGCCGCAGGTGACGGGCACGGGCGGCGAC ATCCAGGTCGGCCGTGAACTCGCGGGCCTGCTGAACCAGGCCGACAAGGAAGCGCAGAAACTGAACGACACGTTCGTCGC GAGCGAGATGTTCCTGCTCGCGGTGGCCGACGACAAGGGCGAAGCCGGCAAGCTCGCGCGCCAGCACGGCCTCACGCGCC GCGCGCTCGAATCCGCGATCGCCGCGGTGCGCGGCGGCTCGCAGGTGCACAGCCAGGATGCCGAGAGCCAGCGCGAGGCG CTGAAGAAATACACGGTCGATCTGACCGAGCGCGCGCGCGCGGGCAAGCTCGATCCGGTGATCGGCCGCGACGACGAGAT TCGCCGCTCGATCCAGATCCTGCAGCGCCGCACGAAGAACAATCCGGTGCTGATCGGTGAGCCGGGCGTCGGCAAGACCG CGATCGTCGAAGGGCTCGCGCAGCGGATCGTCAACGGCGAGGTGCCCGAGACGCTGAAGAACAAGCGCGTGCTGTCGCTC GACATGGCGGCGCTGCTCGCCGGCGCGAAGTATCGCGGCGAGTTCGAGGAGCGTCTGAAGGCGGTGCTCAACGACATCGC GAAGGACGAGGGCCGCACGATCGTCTTCATCGACGAGATCCATACGATGGTCGGTGCGGGCAAGGCCGAAGGCGCGATGG ACGCGGGCAACATGCTCAAGCCCGCGCTGTCGCGCGGCGAGCTGCACTGCATCGGCGCGACGACGCTCGACGAATACCGC AAGTACATCGAGAAGGATGCCGCGCTCGAGCGCCGCTTCCAGAAGGTGCTCGTCGACGAGCCGAGCGTCGAGGCGACGAT CGCGATCCTGCGCGGGCTGCAGGAGAAGTACGAACTGCATCACGGCGTCGAGATCACCGATCCGGCGATCGTCGCCGCGG CGGAACTCTCGCACCGCTACATCACCGACCGCTTCCTGCCCGACAAGGCAATCGATCTGATTGACGAGGCCGCGTCGAGG ATCAAGATGGAAATCGACTCGAAGCCCGAAGAAATGGACAAGCTCGATCGCCGTCTGATCCAGTTGAAGATCGAGCGCGA AGCGGTGAAGAAGGAGCCGGACGAAGCGTCGCAGAAGCGTCTTGCGCTGATCGAGGAGGAAATCGAGCGGCTCGGGCGCG AATACGCGGATCTCGACGAGATCTGGACGGCCGAGAAGGCAGCCGTGCAGGGCAGTGCGCAACTGAAGGAAGAGATCGAC AAGGTGCGTGCCGACATTGCGCGCCTGCAGCGCGAAGGCAAGCTCGAGAAGGTCGCCGAGCTGCAGTACGGCAAGCTGCC GCAACTCGAGGCGCGGCTCAAGCAGGTCACGCAGGCCGAGGAGAGCGAGCAGCACAATCCGACGCGGCCGCGCCTGCTGC GCACGCAGGTCGGCGCGGAGGAAATTGCCGAGGTCGTCTCGCGCGCGACGGGCATTCCGGTGTCGCGGATGATGCAGGGC GAGCGCGAGAAGCTGCTGCACATCGAAGAGAAGCTGCATGAGCGCGTGGTCGGCCAGAACGAGGCGATCGACGCGGTCGC CGACGCGATCCGCCGCTCGCGCGCGGGCCTCGCCGATCCGAACCGTCCGTACGGCTCGTTCCTGTTCCTCGGCCCGACGG GCGTGGGCAAGACCGAGCTGTGCAAGGCGCTCGCCGGCTTCCTGTTCGATTCGGAAGAGCATCTGATCCGCATCGACATG AGCGAGTTCATGGAGAAGCACAGCGTCGCGCGGCTGATCGGCGCGCCGCCCGGCTACGTCGGCTACGAGGAAGGCGGCTA TCTGACCGAAGCCGTGCGTCGCAAGCCGTACAGCGTGATCCTGCTCGACGAGATCGAGAAGGCGCACCCGGACGTGTTCA ACGTGCTGCTGCAGGTGCTCGACGACGGCCGGATGACGGACGGGCAGGGGCGCACCGTCGACTTCAAGAACACCGTGATC GTGATGACGTCGAATCTCGGCTCGCAGCTGATCCAGTCGATGTCGGGCTCGTCGCAGGAAGAGATCAAGGATGCGGTGTG GGTCGAGGTCAAGCAGCACTTCCGCCCCGAGTTCCTGAACCGGATCGACGACGTCGTCGTGTTCCACTCGCTCGACCGCG GCAACATCCAGGCGATCGCGAAGATTCAGCTCGCGCGTCTGCACGACCGGCTCGCGAAGCTCGACATGGCGCTCGACGTG TCGGAGGCCGCGCTCGAGCAGATCGGCAAGGTCGGCTACGATCCGCTGTTCGGTGCGCGGCCGCTCAAGCGCGCGATCCA GCAGGAGATCGAGAATCCGGTCGCGAAGCTGATCCTCGCGGGCCGCTTCGGGCCGAAGGACGTGATTCCGGTCGACATGC AGGACGGCAGGTTCGTGTTCGAGCGCGTCGTGCATTGA Protein sequence : MRIDKLTTKFQEALSDAQSFAAGRDNQYIEPVHVLAALVAQQDGSARSLLSRAGVHIQALQGALNEAISRLPQVTGTGGD IQVGRELAGLLNQADKEAQKLNDTFVASEMFLLAVADDKGEAGKLARQHGLTRRALESAIAAVRGGSQVHSQDAESQREA LKKYTVDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPETLKNKRVLSL DMAALLAGAKYRGEFEERLKAVLNDIAKDEGRTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYR KYIEKDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAASR IKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEPDEASQKRLALIEEEIERLGREYADLDEIWTAEKAAVQGSAQLKEEID KVRADIARLQREGKLEKVAELQYGKLPQLEARLKQVTQAEESEQHNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQG EREKLLHIEEKLHERVVGQNEAIDAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTELCKALAGFLFDSEEHLIRIDM SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVI VMTSNLGSQLIQSMSGSSQEEIKDAVWVEVKQHFRPEFLNRIDDVVVFHSLDRGNIQAIAKIQLARLHDRLAKLDMALDV SEAALEQIGKVGYDPLFGARPLKRAIQQEIENPVAKLILAGRFGPKDVIPVDMQDGRFVFERVVH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 7e-104 | 41 |
