Gene Information

Name : SSA_1100 (SSA_1100)
Accession : YP_001035062.1
Strain : Streptococcus sanguinis SK36
Genome accession: NC_009009
Putative virulence/resistance : Virulence
Product : hemolysin exporter, ATPase component
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG2274
EC number : -
Position : 1120013 - 1122148 bp
Length : 2136 bp
Strand : +
Note : GC: 41.01%; Transporter classification TC:3.A.1.109.1. Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.765. Curator(s): J. Alves

DNA sequence :
ATGAATTATGAACACCTGTCTACTTATTCGGCAGTGGAATGTTTTTTGATTATGTCACAATTTTTAGGAGTGCAGGCAAG
CGAGGAAGATTTAAAACAAATCGCTGCCAATAGTTCCTTTAATGAGTCAATTCCTTTTATGTTGGAAGCAGCAAAATACT
ACCAACTTAAAGGGAAATATGTTGTCTTACCGATGAAAGATTTGGTCAAAAAAGCAGGAAGTATGGTTCCCTTTATAGCT
CAAGATAGGGAGGGGAGTTACTTTATTATTGCAAGATTACAGGAAGAGGAAGCTTTGCTTCTCTATCCAGGAGAGTCCAG
TCCTCATTTACTATCGCTAGAAAAGTTGAAGGAAAAATGGGATGGCTCTGCTATTCTCCTGACTAAAAAAGGATCCTTAA
GAGGAAGTGATTCACTTTTTAGCTTTAAGTGGTTCATTCCGACGGTATTGCGTTTTAAGACAGCCTTTATCCAAGTATTG
CTGGGGATTTTTGTTATTCAGATTTTGGGGATTTCAACTCCCATTATGGTTCAGGTCATTATTGACAAGGTTCTGTCTCA
TCATAGTTTGTCCACTTTGACCGTCATCGCCATTGGGATTGGTCTAGTATATATTTTTGAGCTGATTCTGTCTTTGGCTA
AGAACTATTTATTTACCCATACGACCAACCGTATTGATGTACTACTAAATGCACGCTTGTTTAAACATTTATTTGCTCTG
CCACTGCGCTATTTTGAGGCCAGAAGAGCAGGAGAGACGGTTGCAAGAGTTCAGGAGCTACACCATATTCGGCAATTTTT
GACAGGAACACCTCTATCATCTCTGATTGATGCGTTTTTCATCCTAGTCTATGTAGCGGTTCTATTTTTCTATAGCGTTC
CTCTGACATGGCTGGTGTTGGCATCTATTCCCTGTTTTGCACTTCTGTCAGCCATTGTGACCCCCCTCTTTAAAAAAAGT
TTGGATGAGCAATTCCAAGCAGGTGCAGAGACCAGTTCCTTTTTGGTGGAGTCTATTCAGGGGGTACAGACAGTCAAGTC
ATTTGCTTTGGAATCGAAATTTGAGCAGAAGTGGGGAGACCTTCAGGCGGATTATGTCAAGGCCAACTATCGAACAGCCA
TGATTGCCTCCAATTCAGGAGCGGTTGGACAATTTATTCAGAAAGCGTTTGATCTTTTGATTCTTGTTTTTGGTGCTTTA
GCTGTAATTGATGGTAAATTTACCATTGGGCAATTAGTTGCTTTTAGAATGTTATCTAGCCATATCAGTGGTCCTGTACT
TCGTTTAGTTCAGCTTTGGCAAGAGTATCAACAAGCATCCTTATCAGTAACTCGTATTGGTGATATTTTTAACTCTCCAA
CTGAACTACGTCCAAATGCCTTGGTTGAATTGCCAACTTTAGAAGGGAAGATAGTTTTTGATCACGTTCGTTTTCGATAC
CGTTCAGATGCTTCGGATGTTATTAAAGATATGAGCTTTACTATTCCGGCTGGTAGCATTGTTGGAGTAGTTGGTCGGAG
CGGTTCAGGTAAAAGTACCTTATCCAAGCTCATTCAGCGTCTCTATATCCCAGAGGCTGGGAAAATCTCTATTGACGGTT
TAGACCTGTCTTTGGTTAATCCAGAGCAGTTGAGACGGCAGATTGGCATTGTTTTGCAGGAAAACTTTATGTTTAACGGT
ACAGTGCGGGAAAATATATCTATTCATTTGCCCCTGGCAACTATGGATGAGGTTGTAGCTGCCGCTAAGACAGCAGGAGC
GCATGACTTTATTCTAGGTCTTCCTCAAGGATATGATACCGTTATTGGCGAGAAAGGCCTGGGTTTGTCTGGGGGGCAGA
AACAACGCGTTGCCATTGCTCGCGCTATTTTAGGTAATCCTAAAATTTTGATTTTTGATGAAGCGACCTCAGCTCTGGAT
TATGAGTCAGAACGAATTATCCAAGATAATCTAAAGACTATTTGTCAAGGACGTACGGTGCTTATTATTGCTCATAGGCT
TTCTACATTGGCTGAAGCTGAAAAAATATTAGTAGTTGATGAAGGAAACGTGGTGTCTTATGATAGCCATGAACGACTTC
TTGAAGAAGATGGGCTATACGCACATCTCTATCGCCAACAGGAAAGGGTGGGATAA

Protein sequence :
MNYEHLSTYSAVECFLIMSQFLGVQASEEDLKQIAANSSFNESIPFMLEAAKYYQLKGKYVVLPMKDLVKKAGSMVPFIA
QDREGSYFIIARLQEEEALLLYPGESSPHLLSLEKLKEKWDGSAILLTKKGSLRGSDSLFSFKWFIPTVLRFKTAFIQVL
LGIFVIQILGISTPIMVQVIIDKVLSHHSLSTLTVIAIGIGLVYIFELILSLAKNYLFTHTTNRIDVLLNARLFKHLFAL
PLRYFEARRAGETVARVQELHHIRQFLTGTPLSSLIDAFFILVYVAVLFFYSVPLTWLVLASIPCFALLSAIVTPLFKKS
LDEQFQAGAETSSFLVESIQGVQTVKSFALESKFEQKWGDLQADYVKANYRTAMIASNSGAVGQFIQKAFDLLILVFGAL
AVIDGKFTIGQLVAFRMLSSHISGPVLRLVQLWQEYQQASLSVTRIGDIFNSPTELRPNALVELPTLEGKIVFDHVRFRY
RSDASDVIKDMSFTIPAGSIVGVVGRSGSGKSTLSKLIQRLYIPEAGKISIDGLDLSLVNPEQLRRQIGIVLQENFMFNG
TVRENISIHLPLATMDEVVAAAKTAGAHDFILGLPQGYDTVIGEKGLGLSGGQKQRVAIARAILGNPKILIFDEATSALD
YESERIIQDNLKTICQGRTVLIIAHRLSTLAEAEKILVVDEGNVVSYDSHERLLEEDGLYAHLYRQQERVG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlyB NP_755448.1 hemolysin B Virulence PAI I CFT073 Protein 5e-144 44
hlyB CAD33760.1 hemolysin B Virulence PAI I 536 Protein 5e-144 44
hlyB CAD42038.1 HlyB protein Virulence PAI II 536 Protein 5e-144 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSA_1100 YP_001035062.1 hemolysin exporter, ATPase component VFG1269 Protein 7e-150 45
SSA_1100 YP_001035062.1 hemolysin exporter, ATPase component VFG0907 Protein 2e-144 44
SSA_1100 YP_001035062.1 hemolysin exporter, ATPase component VFG1557 Protein 3e-144 44
SSA_1100 YP_001035062.1 hemolysin exporter, ATPase component VFG1501 Protein 3e-144 44
SSA_1100 YP_001035062.1 hemolysin exporter, ATPase component VFG0841 Protein 2e-140 44