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Name : cobT (Cthe_1297) Accession : YP_001037722.1 Strain : Clostridium thermocellum ATCC 27405 Genome accession: NC_009012 Putative virulence/resistance : Unknown Product : nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG2038 EC number : 2.4.2.21 Position : 1574604 - 1575659 bp Length : 1056 bp Strand : - Note : catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole DNA sequence : ATGCTTTTTCAAACACTGAAATCCATAGGAGAGCTGTATAAAGAACCCATGGACATGGTTCAAAGGAGGCTCGACAGCCT TTCGAAGCCGTTGGGGAGCCTGGGAAGGCTGGAAGATATCATTAAAAAGCTTGCAGGTATAACCGGAGAAGTTTTTCCGT GTGTTGATAAAAAAGCGGTTATTATAATGTGTGCGGACAACGGAGTTGTGGAAGAGGGGATAAGTTCCTGCCCGAAAGAT GTTACTTCCAAAGTGACCAGGAATTTTCTGAAGGGTATAACAGCCATAAATGCTTTTGCAAAGCATACAGGTTCCGATAT TGTAGTGGTTGATATCGGAGTGGATGATGACATGGACTGTGAAGGAATTGTAAAGCGCAAAGTAAGAAAAGGTACCTGGA ATATTGCAAAAGGGCCCGCAATGACGCGCAAAGAGGCAATAGAGGCCATAGAGGTCGGAATTTCCATTGTGGAGGAACTT GGCAGGAAAGGAGTAAATCTTTTAGGCACGGGAGAAATGGGTATTGGCAATACCACGACCAGCAGCGCGGTTTCAACGGT TTTGACAGATTCAAAAGCTGAGAATATGGTGGGCAGGGGAGCAGGCCTTTCGGATGAAGCGCTGAAAAGAAAGATTTCGA TTGTCAAAAAGGCTATAGATTTAAACAGACCCGATGCAAACGACCCTATTGACGTTGTTTCAAAAGTGGGCGGGTTTGAT ATTGCAGGCCTTGCAGGCTGCTTTATCGGTGCAGCGGCATGTAGAATTCCGATCCTTATTGACGGATTTATATCTGCAAC AGCTGCCCTTGCAGCAGTAAGGATGGAGCCGAAGGTCAAAAATTTCATTTTTCCTTCCCATGGTTCAGCAGAACCCGGAA GCAAAAAAGTTATGGAAGCGTTGGGATTTGAACCTATACTGAATCTGGAGATGAGAGTCGGAGAGGGCACCGGTGCGGCA CTGGCATTTCATATTTTTGACTGTGCCGTGTCGGTATACAGGAACATGGGCACATTTGAGGATGCATGTATTGAACAATA TCAGCCTCAGGTGTAA Protein sequence : MLFQTLKSIGELYKEPMDMVQRRLDSLSKPLGSLGRLEDIIKKLAGITGEVFPCVDKKAVIIMCADNGVVEEGISSCPKD VTSKVTRNFLKGITAINAFAKHTGSDIVVVDIGVDDDMDCEGIVKRKVRKGTWNIAKGPAMTRKEAIEAIEVGISIVEEL GRKGVNLLGTGEMGIGNTTTSSAVSTVLTDSKAENMVGRGAGLSDEALKRKISIVKKAIDLNRPDANDPIDVVSKVGGFD IAGLAGCFIGAAACRIPILIDGFISATAALAAVRMEPKVKNFIFPSHGSAEPGSKKVMEALGFEPILNLEMRVGEGTGAA LAFHIFDCAVSVYRNMGTFEDACIEQYQPQV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cobT | YP_853092.1 | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | Not tested | PAI IV APEC-O1 | Protein | 6e-61 | 44 |
