Gene Information

Name : Cthe_2705 (Cthe_2705)
Accession : YP_001039097.1
Strain : Clostridium thermocellum ATCC 27405
Genome accession: NC_009012
Putative virulence/resistance : Unknown
Product : transketolase subunit B
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG3958
EC number : 2.2.1.1
Position : 3191490 - 3192425 bp
Length : 936 bp
Strand : +
Note : PFAM: Transketolase, central region; Transketolase-like; KEGG: cpe:CPE0297 transketolase C-terminal section

DNA sequence : 
ATGCAGGAAAAGATTGCGACAAGGGAAGCTTACGGAAAAACTTTGGCGGAGATAGGATCTGATCCGAGAATAGTTGTCAT
GGATGCGGATTTGTCAAAGTCAACGAAAACGGAATATTTCAAAAATAAATATCCCGAAAGGTTTTTCAATATGGGTATTG
CAGAGGCGAACATGATGGCAGCCGCGGCAGGAATTGCCTCCTGCGGTAAAGTAGTGTTTGCAAGCACTTTCGCGATGTTT
GCTTCGGGAAGGGCTTTTGAACAAATTAGAAATTCCATATGCTATTCCAATCTCGATGTAAAAATCGGTGCATCCCACTC
CGGACTTACCGTGGGTGAAGACGGAGCTTCCCACCAGACCATTGAGGATATAGCGATTATGAGGGTTATACCCAACATGA
CTGTTGTCTGTCCTGCCGATGCCGTTGAGGCAAGACATGCCACAATAGCGGCTTATAAGACGCCGGGACCGTTCTATTTA
AGGCTTACAAGGCTTGCGGTACCGGTTATATTCGACGAAAATTACAAGTTTGAGCTTGGCAAGGGAGTTACGATAAGAGA
CGGCAACGATGTTGCAATAATTGCCACGGGCCTTATGGTGTCAAAAGCCATTGAAGCGGCGGATATTTTAAAGCGTGAGG
GAATTAATGCCAGACTTATCAACATTCATACAATAAAGCCTATTGACAGGGATATAATTATAAAGGCTGCAACTGAAACC
GGTACGATTGTTACGTGTGAAGAACACAGTGTAATCGGAGGACTTGGAAGTGCCGTGGCGGAGGTGCTAGTGGAAACCTG
TCCTGTTCCGATGAGAATGGTTGGAGTTATGGACAGGTTCGGAAAGTCCGGTAAACCGGATGAACTTCTCAAAATGTATG
GATTGACTGCTGAAAATATAGTGGAAAAAGTAAAAGAAGTCTTGAAAAACAAATAG

Protein sequence : 
MQEKIATREAYGKTLAEIGSDPRIVVMDADLSKSTKTEYFKNKYPERFFNMGIAEANMMAAAAGIASCGKVVFASTFAMF
ASGRAFEQIRNSICYSNLDVKIGASHSGLTVGEDGASHQTIEDIAIMRVIPNMTVVCPADAVEARHATIAAYKTPGPFYL
RLTRLAVPVIFDENYKFELGKGVTIRDGNDVAIIATGLMVSKAIEAADILKREGINARLINIHTIKPIDRDIIIKAATET
GTIVTCEEHSVIGGLGSAVAEVLVETCPVPMRMVGVMDRFGKSGKPDELLKMYGLTAENIVEKVKEVLKNK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96118.1 transketolase Not tested T-PAI Protein 9e-38 46
unnamed AAT96230.1 transketolase Not tested T-PAI Protein 4e-31 45
unnamed AAT96057.1 transketolase Not tested T-PAI Protein 4e-41 42
unnamed AAT96101.1 transketolase Not tested T-PAI Protein 4e-41 42