Gene Information

Name : Cthe_R0054 (Cthe_R0054)
Accession : -
Strain : Clostridium thermocellum ATCC 27405
Genome accession: NC_009012
Putative virulence/resistance : Unknown
Product : 16S ribosomal RNA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3427593 - 3429113 bp
Length : 1521 bp
Strand : +
Note : -

DNA sequence : 
AGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAACACATGCAAGTCGAGCGGGGATATACGGAAGGTTTA
CCGGAAGTATATCCTAGCGGCGGACGGGTGAGTAACGCGTGGGTAACCTACCTCATACAGGGGGATAACACAGGGAAACC
TGTGCTAATACCGCATAACATAACGGGGCGGCATCGTCCTGTTATCAAAGGAGAAATCCGGTATGAGATGGGCCCGCGTC
CGATTAGCTAGTTGGTGAGGTAACGGCTCACCAAGGCGACGATCGGTAGCCGAACTGAGAGGTTGGTCGGCCACATTGGG
ACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGCGCAATGGGGGAAACCCTGACGCAGCAACGC
CGCGTGAAGGAAGAAGGCCTTCGGGTTGTAAACTTCTTTGATTGGGGACGAAGGAAGTGACGGTACCCAAAGAACAAGCC
ACGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGTGGCGAGCGTTGTCCGGAATTACTGGGTGTAAAGGGCGCGT
AGGCGGGGATGCAAGTCAGATGTGAAATTCCGGGGCTTAACCCCGGCGCTGCATCTGAAACTGTATCTCTTGAGTGCTGG
AGAGGAAAGCGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTTCTGG
ACAGTAACTGACGCTGAGGCGCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGG
ATACTAGGTGTAGGAGGTATCGACCCCTTCTGTGCCGGAGTTAACACAATAAGTATCCCACCTGGGGAGTACGGCCGCAA
GGTTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCAGTGGAGTATGTGGTTTAATTCGAAGCAACGCGAAGAACCT
TACCAGGGCTTGACATCCCTCTGACAGCTCTAGAGATAGGGCTTCCCTTCGGGGCAGAGGAGACAGGTGGTGCATGGTTG
TCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTGTCGTTAGTTGCCAGCACGTTAAGG
TGGGCACTCTAGCGAGACTGCCGGCGACAAGTCGGAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATGTCCTG
GGCTACACACGTACTACAATGGCTGCTACAAAGGGAAGCGATACCGCGAGGTGGAGCAAATCCCCAAAAGCAGTCCCAGT
TCGGATTGCAGGCTGAAACTCGCCTGCATGAAGTCGGAATTGCTAGTAATGGCAGGTCAGCATACTGCCGTGAATACGTT
CCCGGGCCTTGTACACACCGCCCGTCACACCATGAGAGTCTGCAACACCCGAAGTCAGTAGTCTAACCGCAAGGAGGGCG
CTGCCGAAGGTGGGGCAGATGATTGGGGTGAAGTCGTAACAAGGTAGCCGTATCGGAAGGTGCGGCTGGATCACCTCCTT
T

Protein sequence : 
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
FTT_r07 - 16S ribosomal RNA Not tested FPI DNA e-129 87.4
FTT_r10 - 16S ribosomal RNA Not tested FPI DNA e-129 87.4
FTM_1085 - 16S ribosomal RNA Not tested FPI DNA e-129 87.3
FTM_1695 - 16S ribosomal RNA Not tested FPI DNA e-129 87.3
FTW_2069 - 16S ribosomal RNA Not tested FPI DNA e-129 87.3
FTW_2070 - 16S ribosomal RNA Not tested FPI DNA e-129 87.3