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Name : rnhA (Cthe_0673) Accession : YP_001037101.1 Strain : Clostridium thermocellum ATCC 27405 Genome accession: NC_009012 Putative virulence/resistance : Unknown Product : ribonuclease H Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0328 EC number : 3.1.26.4 Position : 829428 - 829871 bp Length : 444 bp Strand : + Note : An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids DNA sequence : ATGAAAAAAGTAAGTATCTATACTGACGGTGCTTGTTCCGGAAATCCGGGGGACGGAGGATGGGGAGCGATACTGATATA CGGAAATCATGAAAAAGAAGTGTCCGGATTTGAAAAAGACACTACAAACAACAGGATGGAGCTTGTTGCTGCCATTAACG CTCTAAAGATGTTAAAGGAACCGTGTGAAGTGGACCTTTACAGTGACAGTGCCTATCTTGTAAACGGCTTTTTGCAAAAC TGGGTTGAAAAGTGGAAGAAAAACGGCTGGAAGACTTCCAACAAAGAAGAGGTGAAAAATATGGAACTGTGGCAGGAACT TGACAGGCTGAGCAATATTCACAAAATCAGGTGGATTAAAGTAAAAGGCCACAGTGACAATGAATACAATAACAGGTGCG ACAAGCTGGCCACAGATGAGATCAAAAAAAACAGCAAAAAATAA Protein sequence : MKKVSIYTDGACSGNPGDGGWGAILIYGNHEKEVSGFEKDTTNNRMELVAAINALKMLKEPCEVDLYSDSAYLVNGFLQN WVEKWKKNGWKTSNKEEVKNMELWQELDRLSNIHKIRWIKVKGHSDNEYNNRCDKLATDEIKKNSKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rnhA | AAO17224.1 | RnhA | Not tested | tcd island | Protein | 2e-27 | 49 |
