|
Name : secF (APL_1068) Accession : YP_001053765.1 Strain : Actinobacillus pleuropneumoniae L20 Genome accession: NC_009053 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecF Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0341 EC number : - Position : 1236707 - 1237681 bp Length : 975 bp Strand : + Note : forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins f DNA sequence : ATGGCAACTATGCAAAAAGAAAAAGATGCGTCGGAAATCAAGCTGCCGTATAAGCTTATTCCATTTATGAAATATCGTTA TGTCGGTTTCGTCTTTTCACTCATCGTTACCGCATTATGTATTTTCTCTATCGTTACCAAAGGTTTTAACTGGGGATTGG ACTTTACCGGCGGTACGGTCATTGAAACGACCTTTTCCCAACCAGCCGATTTAAGCAAAGTACGCGGTTTATTGGAACAA AACGGTTACGGTAATGCGTTAGTACAAACCACCGGTAGCCAAAAAGAACTGATGATTCGTTTACCGGCATCCGCCGGCGA TATGTCGTTGGGTAATAAAATTATGGATCTTGTCCATCAAGATTTAGATCCTGCGGCAACGATTAAAAGTGTTGAGTTCG TCGGACCGAATGTCGGGGAAGAGCTGACTCAAGGGGCGATTTGGGCAACACTTGCCACACTGGGGATGTTATTGCTTTAC GTCGGTACGCGTTTTGAAATCCGTTTAGCAATCGGCGGTATTTTGGCATTATTCCATGACGTATTGGTAACTATCGGTAT TTTCTCATTCTTACAGATTGAGATTGATCTGACTTTCGTGGCGGCAATTCTTTCCGTGGTAGGTTATTCATTAAATGACT CTATCGTTGTATTCGACCGTGTACGTGAGAACTTTAGTAAAATCCGTCGTATAAATTCACAAGAAGTCATCGATATTTCA TTAAGCCAAACGCTTTCAAGAACCTTAATGACTTCCGTTACGACCTTATTCGTTGTTTCGGCGTTATATTGGTTTGGCGG TCCGACAATCCATAGCTTCTCGCTTGCCTTATTAATCGGTATCGGTTTCGGTACTTATTCATCGATTTATATTGCAATCG GTGTGGCATTACAACTCGGTTTAAATCGTGAACATATGGTTAAACCGGTAGTGGAAAAAGAAGGTGCGGATCAACAAGCG TTTATTGATCATTAA Protein sequence : MATMQKEKDASEIKLPYKLIPFMKYRYVGFVFSLIVTALCIFSIVTKGFNWGLDFTGGTVIETTFSQPADLSKVRGLLEQ NGYGNALVQTTGSQKELMIRLPASAGDMSLGNKIMDLVHQDLDPAATIKSVEFVGPNVGEELTQGAIWATLATLGMLLLY VGTRFEIRLAIGGILALFHDVLVTIGIFSFLQIEIDLTFVAAILSVVGYSLNDSIVVFDRVRENFSKIRRINSQEVIDIS LSQTLSRTLMTSVTTLFVVSALYWFGGPTIHSFSLALLIGIGFGTYSSIYIAIGVALQLGLNREHMVKPVVEKEGADQQA FIDH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secF | AAT96102.1 | SecF | Not tested | T-PAI | Protein | 4e-59 | 50 |
| secF | AAT96066.1 | SecF | Not tested | T-PAI | Protein | 3e-59 | 50 |
