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Name : apxIB (APL_1443) Accession : YP_001054132.1 Strain : Actinobacillus pleuropneumoniae L20 Genome accession: NC_009053 Putative virulence/resistance : Virulence Product : toxin RTX-I translocation ATP-binding protein Function : - COG functional category : V : Defense mechanisms COG ID : COG2274 EC number : - Position : 1650723 - 1652846 bp Length : 2124 bp Strand : - Note : pubmed:8181764 DNA sequence : ATGGATTTTTATCGGGAAGAAGACTACGGATTATACGCACTGACGATTTTAGCCCAGTACCATAATATTGCTGTAAATCC GGAAGAACTAAAACATAAATTCGACCTTGAAGGAAAAGGCTTAGATCTAACCGCTTGGCTATTAGCCGCAAAATCATTAG AACTTAAAGCAAAACAAGTAAAAAAAGCGATTGATCGTTTGGCGTTTATCGCACTACCGGCACTTGTATGGCGAGAAGAC GGTAAACATTTTATTTTGACTAAAATTGATAATGAAGCAAAAAAATATTTAATTTTTGATTTGGAAACGCATAATCCTCG CATTTTGGAACAAACGGAATTCGAGAGCTTATACCAAGGAAAACTGATTTTAGTTGCATCAAGAGCTTCCATCGTAGGTA AGCTGGCAAAGTTTGACTTCACTTGGTTTATACCGGCGGTAATTAAGTATCGTAAGATTTTTATTGAAACGTTAATTGTT TCAATTTTTTTGCAAATTTTCGCACTAATTACACCGCTTTTTTTCCAAGTCGTGATGGATAAAGTCTTGGTACACCGAGG TTTTTCAACCTTAAATGTGATTACGGTGGCATTAGCGATCGTCGTGCTGTTTGAAATTGTGCTAAACGGTTTACGTACCT ATATTTTTGCGCATAGTACCAGCCGTATTGATGTGGAGCTGGGAGCAAGATTATTCAGACATTTATTAGCACTCCCAATC TCTTATTTTGAAAATCGTCGAGTCGGCGATACGGTGGCTCGTGTACGAGAACTCGATCAAATTCGTAACTTCTTAACCGG GCAGGCACTTACTTCCGTGTTGGATTTAATGTTTTCCTTTATCTTCTTTGCAGTGATGTGGTATTACAGCCCTAAACTTA CTCTTGTGATTTTAGGCTCGTTACCGTTTTATATGGGGTGGTCGATTTTTATCAGCCCTATTTTACGTCGCCGTTTAGAT GAAAAATTCGCACGTGGTGCGGACAATCAGTCATTCTTAGTGGAATCGGTGACTGCAATCAATACGATTAAAGCGTTGGC GGTTACCCCTCAAATGACTAATACCTGGGATAAGCAATTAGCCAGCTATGTATCGGCGGGATTCCGTGTAACCACATTAG CTACTATCGGACAGCAAGGTGTACAATTTATTCAAAAAGTCGTGATGGTTATTACCTTATGGCTAGGCGCACATTTAGTG ATTTCAGGCGATTTAAGTATCGGACAATTAATCGCATTTAATATGTTATCCGGTCAAGTGATTGCACCGGTGATTCGTTT AGCGCAACTTTGGCAAGATTTCCAACAAGTGGGAATTTCGGTAACGCGTTTAGGTGATGTTTTAAACTCTCCGACCGAGA GCTATCAAGGAAAATTGGCGTTACCGGAAATTAAAGGTGATATTACCTTCCGTAATATACGCTTCCGCTACAAACCGGAT GCGCCGGTGATTTTAAATGATGTGAATTTATCGATTCAGCAAGGTGAAGTGATCGGTATCGTAGGACGTTCAGGCTCAGG GAAGAGCACCTTAACGAAATTAATTCAACGTTTTTATATTCCGGAAAACGGTCAGGTATTAATAGATGGGCATGATTTAG CATTGGCGGATCCGAACTGGCTACGTCGTCAAGTCGGGGTGGTATTACAAGATAACGTACTATTAAATCGTAGTATTCGA GATAATATTGCCTTAGCGGATCCGGGTATGCCAATGGAAAAAATTGTCCATGCGGCAAAATTAGCCGGCGCACATGAATT TATTTCTGAATTGCGTGAGGGATATAACACGATTGTTGGTGAGCAAGGTGCGGGGCTATCGGGCGGGCAACGCCAACGTA TTGCGATTGCACGCGCTTTGGTGAATAACCCGAAAATCTTAATTTTTGATGAAGCGACCAGCGCATTAGATTATGAATCC GAGCATATTATCATGCGCAATATGCACCAGATTTGTAAAGGGAGAACGGTAATTATCATTGCACACCGTTTATCTACGGT AAAAAATGCCGACCGTATTATTGTGATGGAAAAAGGTCAGATTGTGGAACAAGGTAAGCATAAAGAGCTGCTTGCTGATC CAAACGGCTTATATCACTACTTACACCAATTACAATCGGAATAG Protein sequence : MDFYREEDYGLYALTILAQYHNIAVNPEELKHKFDLEGKGLDLTAWLLAAKSLELKAKQVKKAIDRLAFIALPALVWRED GKHFILTKIDNEAKKYLIFDLETHNPRILEQTEFESLYQGKLILVASRASIVGKLAKFDFTWFIPAVIKYRKIFIETLIV SIFLQIFALITPLFFQVVMDKVLVHRGFSTLNVITVALAIVVLFEIVLNGLRTYIFAHSTSRIDVELGARLFRHLLALPI SYFENRRVGDTVARVRELDQIRNFLTGQALTSVLDLMFSFIFFAVMWYYSPKLTLVILGSLPFYMGWSIFISPILRRRLD EKFARGADNQSFLVESVTAINTIKALAVTPQMTNTWDKQLASYVSAGFRVTTLATIGQQGVQFIQKVVMVITLWLGAHLV ISGDLSIGQLIAFNMLSGQVIAPVIRLAQLWQDFQQVGISVTRLGDVLNSPTESYQGKLALPEIKGDITFRNIRFRYKPD APVILNDVNLSIQQGEVIGIVGRSGSGKSTLTKLIQRFYIPENGQVLIDGHDLALADPNWLRRQVGVVLQDNVLLNRSIR DNIALADPGMPMEKIVHAAKLAGAHEFISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYES EHIIMRNMHQICKGRTVIIIAHRLSTVKNADRIIVMEKGQIVEQGKHKELLADPNGLYHYLHQLQSE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hlyB | NP_755448.1 | hemolysin B | Virulence | PAI I CFT073 | Protein | 0.0 | 87 |
| hlyB | CAD33760.1 | hemolysin B | Virulence | PAI I 536 | Protein | 0.0 | 87 |
| hlyB | CAD42038.1 | HlyB protein | Virulence | PAI II 536 | Protein | 0.0 | 87 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| apxIB | YP_001054132.1 | toxin RTX-I translocation ATP-binding protein | VFG1557 | Protein | 0.0 | 87 |
| apxIB | YP_001054132.1 | toxin RTX-I translocation ATP-binding protein | VFG1501 | Protein | 0.0 | 87 |
| apxIB | YP_001054132.1 | toxin RTX-I translocation ATP-binding protein | VFG0907 | Protein | 0.0 | 87 |
| apxIB | YP_001054132.1 | toxin RTX-I translocation ATP-binding protein | VFG0841 | Protein | 0.0 | 73 |
| apxIB | YP_001054132.1 | toxin RTX-I translocation ATP-binding protein | VFG1269 | Protein | 0.0 | 55 |
