Gene Information

Name : Pcal_0238 (Pcal_0238)
Accession : YP_001055141.1
Strain : Pyrobaculum calidifontis JCM 11548
Genome accession: NC_009073
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 236144 - 236815 bp
Length : 672 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pai:PAE2785 ABC transporter ATP-binding protein

DNA sequence : 
ATGCGCGTGGAGATCGTAGTCAAAGACGTGGTTAAGTACTACGGCGACTACCCCGCGCTCAGGGGGGTTACCCTCGAAGT
TCCGCGCGGTGTGTGGCAGTGCCTCGTGGGGCCCTCTGGCAGCGGGAAGTCCACGCTCCTCCACATCATTGGAGGTGTGG
ACAAGCCCACCAAGGGGACTGTGGAAGTTGCGGGGGTGAGACTCAACGACCTCAACGACGACCAGCTGGCCGAGTTCCGG
AACAAGAACATCGGCTTCGTCTTCCAAATGTTCTACCTAATCCCCAGGATGTCCATCCTCGAAAACGTGGAGCTCCCCCT
AATCCTCCGCGGCGTCCCCAAGGCAAGGCGGAGGGAGGCGGCGCTTGAGGCGCTTAGGCTAGTCGGCCTCGGCCACATAG
ACCCAAGGCGCAGGCCCACCCAGCTCTCCGGCGGCGAGCAGCAGCGCGTGGCAATAGCCAGGGCCATTGTGACGCGGCCC
CGCATACTGCTCGCCGACGAGCCCACGGGCAACTTAGACTCGGCCACCACCAAGGTCATAATGGACATCTTCACACAGCT
GAAGAAGGAGCTGGGCATCACCATCGTCATGGTGACCCACAATCTAGAACTCTTGTCCTACTGCGACAGATACGCGAGAA
TGAGAGACGGGCGTATCGTGGAGCAGGGCTAG

Protein sequence : 
MRVEIVVKDVVKYYGDYPALRGVTLEVPRGVWQCLVGPSGSGKSTLLHIIGGVDKPTKGTVEVAGVRLNDLNDDQLAEFR
NKNIGFVFQMFYLIPRMSILENVELPLILRGVPKARRREAALEALRLVGLGHIDPRRRPTQLSGGEQQRVAIARAIVTRP
RILLADEPTGNLDSATTKVIMDIFTQLKKELGITIVMVTHNLELLSYCDRYARMRDGRIVEQG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-27 44
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-23 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pcal_0238 YP_001055141.1 ABC transporter NC_012469.1.7686878. Protein 1e-36 49
Pcal_0238 YP_001055141.1 ABC transporter NC_008702.1.4606598. Protein 1e-27 46
Pcal_0238 YP_001055141.1 ABC transporter CP001581.1.gene598.p Protein 9e-35 45