Gene Information

Name : Pcal_0894 (Pcal_0894)
Accession : YP_001055786.1
Strain : Pyrobaculum calidifontis JCM 11548
Genome accession: NC_009073
Putative virulence/resistance : Unknown
Product : transketolase subunit B
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG3958
EC number : -
Position : 851314 - 852258 bp
Length : 945 bp
Strand : +
Note : PFAM: Transketolase, central region; Transketolase domain protein; KEGG: pai:PAE1927 transketolase (C terminal section)

DNA sequence : 
ATGTTAGACATACAGAGCTTAACCCCACGCGAGGCCTTGGGCAGGGCGCTTGCGGACCTCGGAGACTTGAGAGAGGACGT
AGTGGTCATCGTGGCGGACACGGGCGAGACTACTAGGGCCAAGTTCTTCGCCGAGAGACACCCCGGGCGCTTCTTCAACG
TGGGGATAGCCGAGCAGGCCATGGTGGGCATAGCGGCTGGGCTCGCCCTCGCCGGCTTTATGCCCTACGCCCTCACCTTC
GCCTCGTTTTTAACAAGGGCGTGGGAGCAAGCGCGTAACTCAGTGGACAGGATGGCCCTCCCAGTGAGGCTCGTGGGGAC
TCACGCAGGCTTCGCCGACGCCTACGACGGACCTTCGCACCAGGCGTTGGAGGACATAGCGCTGTTCAGAGTTTTGCCCA
ACTTCACAGTACTGGCCCCGGCCGACTCGTGCGAGGTGTATAGGGCGGTGCTGGCGTCGGCGGCTGTTAAGGGGCCGGTC
TACATAAGAGTTGGGCGTGACTTCCACATCCCCACGACTTGTGAGCTATACGGAAGATTTGAAGTGGGCAAGGCGTATGT
GGCCGTTGAGGGGGGCGACGTGGCCATTTTCACCACAGGCGTAGTGTTGCCCTTCGCCGTGGAGGCGGCGCAGATACTGC
GCGACAGGGGGATCTCCGCCGCAGTGGTACACTTCCCCACAGTGAAGCCGCTCGACTACGCCACAGTGGAGAAGTACGCC
CAGGCCACCGGCGCCGTTTTAACCGTGGAGGAGCACATGGTGCACGGCGGCTTCGGCTCGGCTGTGGCAGAGTACCTCGT
TCAGACGAGGCCCGTGAAAATGGCGATAATGGGCCTCAAGTCGTACGGCAGAACTGCCAAAAGCCCAATGGAGCTCTACA
CGTACTTCGGCCTCACGCCTGAGAACATAGCCGCCAGGGCAGAGGAGCTGGTGAAACTGCGATGA

Protein sequence : 
MLDIQSLTPREALGRALADLGDLREDVVVIVADTGETTRAKFFAERHPGRFFNVGIAEQAMVGIAAGLALAGFMPYALTF
ASFLTRAWEQARNSVDRMALPVRLVGTHAGFADAYDGPSHQALEDIALFRVLPNFTVLAPADSCEVYRAVLASAAVKGPV
YIRVGRDFHIPTTCELYGRFEVGKAYVAVEGGDVAIFTTGVVLPFAVEAAQILRDRGISAAVVHFPTVKPLDYATVEKYA
QATGAVLTVEEHMVHGGFGSAVAEYLVQTRPVKMAIMGLKSYGRTAKSPMELYTYFGLTPENIAARAEELVKLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96118.1 transketolase Not tested T-PAI Protein 2e-29 42
unnamed AAT96057.1 transketolase Not tested T-PAI Protein 2e-29 41
unnamed AAT96101.1 transketolase Not tested T-PAI Protein 1e-29 41