|
Name : glcF (BURPS668_3298) Accession : YP_001060309.1 Strain : Genome accession: NC_009074 Putative virulence/resistance : Unknown Product : glycolate oxidase iron-sulfur subunit Function : - COG functional category : C : Energy production and conversion COG ID : COG0247 EC number : 1.1.3.15 Position : 3239669 - 3240895 bp Length : 1227 bp Strand : + Note : identified by match to protein family HMM PF00037; match to protein family HMM PF02754 DNA sequence : ATGCAGACGAACCTCGCCGATTTCATCCGCCACACGCCCGACGGCGACGACGCCGACGCGATCCTGCGCAGGTGCGTGCA CTGCGGCTTCTGCACCGCGACCTGCCCGACTTACCAGTTGCTCGGCGACGAGCTCGACGGCCCGCGCGGACGCATCTACC TGATCAAGCAGATGCTCGAGGGCGCGGAAGTCACGCGCAGCACGCAGCAGCACCTCGACCGCTGCCTCACGTGCCGCAGT TGCGAGACGACCTGCCCGTCGGGCGTCGAGTACGGCCGGCTCGTCGACATCGGCCGCAAGGTCGTCGAGACGAAGGTGTC GCGGCCGCTGTCGCAGCGGATCGTGCGGCGCCTGCTCGCGAGCTTCGTGCCGAACGCGGCCGTGTTCGCGCCCGTGATGC GGCTCGGCCAGCATGTGCGGCCGCTGTTGCCGAAGCGGCTGCGCGACAAGGTGCCGCCGCGCGCGCGCCTGCTCGCGTGG CCGAGCGCGCGGCGCAAGCGCCACGTGCTGATGCTCGCGGGCTGCGTGCAGCCTTCGATGATGCCGAACATCAACATCGC GACCGCGCGCGTGCTGGATGCGCTCGGCATCGAAACCGTGGTCGCGCCGGAAGCCGGCTGCTGCGGCGCGATCCGGCTGC ATCTGGGCTATCACGATGAAGCGCTCGACGATGCGCGACGCAACATCGACGCGTGGTGGCCGCACATCGAGCGCGGCGTC GAAGCGATCGTGATGAACGCGTCCGGCTGCGGCGCGACGGTGCGCGAGTACGCGCACCTGCTGCGCGGCGATCCGGCCTA CGCGGACAAGGCGCGCCGCATCGTCGAGCTGACGAAGGACGCATCCGAGCTGCTCGGCGGCTTCGAGGCCGAGCTGATCG CGCTCACGCGCCGGCGCGGAATCCATACCGTCGCCTATCATCCGCCGTGCACGCTGCAGCACGGCCAGCAGTTGCGCGGC AAGGTCGAGCGGCTGCTGGAGGGGCTCGGCATCGAAGTTCGGCTGCCCGCCGACAGCCATCTGTGCTGCGGCTCCGCGGG CACCTATTCGCTCACGCAGCCGTCGCTCGCGTACAAGCTGCGCAAGCGCAAGCTCGCGAAGCTGCAGGAGACCGAGCCGC AGATGATCGTATCGGCGAACATCGGCTGCATCGCGCATCTGCAAAGCGGCACGGCGGTGCCCGTCGTGCACTGGGTGCAG CTCGTCGAGAATCTGCTGTACGGTTGA Protein sequence : MQTNLADFIRHTPDGDDADAILRRCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQMLEGAEVTRSTQQHLDRCLTCRS CETTCPSGVEYGRLVDIGRKVVETKVSRPLSQRIVRRLLASFVPNAAVFAPVMRLGQHVRPLLPKRLRDKVPPRARLLAW PSARRKRHVLMLAGCVQPSMMPNINIATARVLDALGIETVVAPEAGCCGAIRLHLGYHDEALDDARRNIDAWWPHIERGV EAIVMNASGCGATVREYAHLLRGDPAYADKARRIVELTKDASELLGGFEAELIALTRRRGIHTVAYHPPCTLQHGQQLRG KVERLLEGLGIEVRLPADSHLCCGSAGTYSLTQPSLAYKLRKRKLAKLQETEPQMIVSANIGCIAHLQSGTAVPVVHWVQ LVENLLYG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcF | CAE85243.1 | GlcF protein | Not tested | PAI V 536 | Protein | 5e-108 | 57 |
