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Name : secD (BURPS668_3330) Accession : YP_001060341.1 Strain : Genome accession: NC_009074 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 3268226 - 3270253 bp Length : 2028 bp Strand : + Note : part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of DNA sequence : ATGAATCGTTATCCAATCTGGAAATATGTGGTGATGGTCGTGGCGCTCGCCATCGGCTTTCTGTACACATTGCCCAACTT CTTCGGCGAAGCGCCGGCGGTGCAGGTATCGAGCGGCAAGGCCACGGTCAAGCTCGGCGCCGATACGCTCGCGCAGGTCG AAGCAGCGCTCAAGGCCAACCAGGTCGCGGCCGACGACGTCACGTTCGACAATTCCAGCGCCAACGCGACCATCCGCGTG CGCCTGAAGGACACCGACACGCAATTGCGCGTGAAGGACATGCTGCAAAAGACGCTGAACGCCGATCCGAACGATCCGCA GTACGTCGTCGCGTTGAACCTGCAGAGCGCGTCGCCGCGCTGGCTGAGCGCGCTGCACGCGCTGCCGATGTATCTCGGCC TCGATCTGCGCGGCGGCGTCCACTTCCTGCTGCAAGTCGACATGACGGGCGCGCTCACGAAGAAGCTCGATTCCGACGCG TCCGACGCCCGCACGCAACTGCGCGACAAGGGCATTCGCGACGGCGGCGTCGCCCGCGTCGATCAGTCGGTCGTCGCGAA CTTCGCCGACCAGGACACCGCCGAGCAAGCGCGCAAGCTGCTCGCCTCGTCCGTCTCCGAACTCCAGTGGGCGACGCAGC CGGGCGGCGGCGGCTATCAGGTCGTCGGCACGTTCACGCCGGCCGTCCAGAAAGCCGTCGAGGAAGCGGCGCTCAAGCAG AACCTGACGACGCTGCACAACCGCGTCAACGAACTCGGCGTGTCCGAGCCGATCCTCCAGCAGCAGGGCAACGACCGGAT CGTCGTCGAGCTGCCGGGCGTGCAGGACACCGCGAAGGCGAAGGACATCATCGGCCGCACCGCGACGCTCGAGGCGCGCC TCGCCGATCCGCTGAACACGCACCCGAATCCGAACGATCCGGTGCCGCCGGGCGAGGAACTGTTCACGCAGGGCAACCAG GCGCCGGTGCTGCTCAAGAAGCAGGTGATCTTCACGGGCGACCGCATCATCGACGCGTCCGCGGGCTTCGACGAGCATCA GCGTCCGTCCGTGAACATCCGCCTCGATTCGGCGGGCGGCCGCGCGGTGCGCGCGGTGTCGCGCGAGAACATCGGCAAGC CGATGGCGATGGTGCTGTTCGAGAAGGGCAAGGGCGAAGTGCTGACCGTCGCGACGATCCAGTCGGAGCTCGGCGACCGC TTCCAGATCACGGGCCAGCCGACCCCGCAGGCGGCCGCCGATCTCGCGCTGCTGCTGCGCGCGGGCTCGCTCGCCGCGCC GATGGACATCATCGAGGAACGCACGATCGGCCCGAGCCTCGGCGCGGACAACATCCGGATGGGCTTCCATTCGGTGATCT GGGGCTTCGTCGCGATCGCCGTGTTCATGATCGCGTACTACATGCTGTTCGGCGTCGTATCGGTGCTCGGCCTGTCGGTG AACCTGCTGCTGCTCGTCGCGGTGCTGTCGCTGATGCAGGCGACGCTCACGCTGCCCGGCATCGCGGCCATCGCGCTCGC GCTCGGCATGGCGATCGACTCGAACGTGCTGATCAACGAGCGCATCCGCGAGGAGCTGCGCCGCGGCGCCTCGCCGCAGA TCGCGATCCAGGAAGGCTACGCGCACGCGTGGGCGACGATTCTCGATTCGAACGTGACGACGCTGATCGCGGGCCTCGCG CTGCTCGCCTTCGGCTCGGGCCCGGTGCGCGCGTTCGCGATCGTGCACTGCCTCGGCATCCTGACGTCGATGTTCTCCGC GGTGTTCTTCTCGCGCGGCCTCGTGAACCTCTGGTACGGCGGGCGCAAGAAGCTGCAGTCGCTCGCGATCGGCCAGGTGT GGCGCCCCGCCGCCGCCGAAGCCGGCGCCGCGCCGCAGCTCGGCCAGGACGCGCGCGCGAACGCGCCGCAGCCCGGCGCG CGCGTCGCCGCGCCGAAGCAGCCGGCGGGCGCGCCGCGCACCGGCAAGCCGGTCGCGCGCCGCCGCTCGGGCCCGGGCGT GCCGCCCAAGCAGGGCTCGTCCAACTAA Protein sequence : MNRYPIWKYVVMVVALAIGFLYTLPNFFGEAPAVQVSSGKATVKLGADTLAQVEAALKANQVAADDVTFDNSSANATIRV RLKDTDTQLRVKDMLQKTLNADPNDPQYVVALNLQSASPRWLSALHALPMYLGLDLRGGVHFLLQVDMTGALTKKLDSDA SDARTQLRDKGIRDGGVARVDQSVVANFADQDTAEQARKLLASSVSELQWATQPGGGGYQVVGTFTPAVQKAVEEAALKQ NLTTLHNRVNELGVSEPILQQQGNDRIVVELPGVQDTAKAKDIIGRTATLEARLADPLNTHPNPNDPVPPGEELFTQGNQ APVLLKKQVIFTGDRIIDASAGFDEHQRPSVNIRLDSAGGRAVRAVSRENIGKPMAMVLFEKGKGEVLTVATIQSELGDR FQITGQPTPQAAADLALLLRAGSLAAPMDIIEERTIGPSLGADNIRMGFHSVIWGFVAIAVFMIAYYMLFGVVSVLGLSV NLLLLVAVLSLMQATLTLPGIAAIALALGMAIDSNVLINERIREELRRGASPQIAIQEGYAHAWATILDSNVTTLIAGLA LLAFGSGPVRAFAIVHCLGILTSMFSAVFFSRGLVNLWYGGRKKLQSLAIGQVWRPAAAEAGAAPQLGQDARANAPQPGA RVAAPKQPAGAPRTGKPVARRRSGPGVPPKQGSSN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 2e-90 | 43 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 2e-90 | 43 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 2e-90 | 43 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 2e-90 | 43 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 1e-90 | 43 |
